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Costa, A. F.

Publications and source records attributed to Costa, A. F..

2 recordsLinked to original sources

Patient-derived organoids to study glycosylation dynamics during gastric disease

BACKGROUND AND AIMSAberrant cellular glycosylation remains a key event that accompanies and actively sustains gastric neoplastic transformation. Patient-derived organoids (PDOs) have recently emerged as a promising ex vivo model to study human gastric disorders. Since the PDOs glycosylation landscape remains unknown, this study aims to evaluate PDOs as potential avatars of in vivo tissue glycosylation profiles in the gastric context. METHODSFresh gastric mucosa samples derived from non-tumoral obese patients (n=11), adjacent tumor mucosa samples (n=29), and tumor tissue samples derived from gastric cancer (GC) patients (n=30) were used to establish a biobank of gastric PDOs (n=56). The N- and O-glycophenotypes of normal, adjacent, and tumor PDOs and respective in vivo tissues were thoroughly characterized by immunostaining. Additionally, a comparative glycan analysis was performed over time, upon PDO biobanking and xenografting in mice. The binding of two Helicobacter pylori (H. pylori) isogenic strains with distinct glycan-binding affinities was assessed in parental gastric mucosa tissues and compared with the respective PDOs before and after modulation of their glycan landscape. RESULTSOur results show that PDOs mimic different phenotypes of the carcinogenic cascade and recapitulate parental gastric tissues glycosylation profile. Tumor PDOs recapitulate the inter- and intra-heterogeneity features observed in GC, which is maintained over time, upon biobanking and xenografting. We demonstrated that the expression of type I and type II Lewis antigens is dynamically controlled by PDOs differentiation status, which results in differential binding to H. pylori strains displaying distinct glycan-binding adhesins, mirroring the gastric epithelium tissue interactions. CONCLUSIONSThis study established PDOs as invaluable ex vivo tools to study the complex glycan dynamics in both gastric physiological and pathological settings.

cell biology↗

Drivers of dispersal and diversification in bromeliads

O_LIDispersal strategies strongly influence an array of plant traits, especially the shape and function of fruits and seeds, and can be important drivers of diversification dynamics. In this study we investigated how fruit morphology and habitat influence dispersal capacity and diversification rate in bromeliads. We hypothesize that (1) the evolution of berry fruits increased dispersal capacity and diversification rates; and (2) climatic factors contribute to increased dispersal capacity and diversification rates. C_LIO_LITo understand the influence of fruit and habitat traits on evolutionary dynamics, we generated a time-calibrated phylogeny including 1,268 species of bromeliads and integrated that evolutionary framework with distribution, habitat, and morphological trait data. C_LIO_LIWe find that lineages with berry fruits have the highest rates of diversification. We also identify significant correlation between diversification rates and both elevation and forest canopy height. We demonstrate that dispersal capacity is not related to fruit morphology and covaries with forest canopy height and mean annual temperature. C_LIO_LIWe show that factors influencing the dispersal capacity and diversification are heterogeneous among the subfamilies. These new insights into the rise and spread of bromeliads emphasize the importance of considering the plurality of morphological and ecological features to improve the understanding of the evolutionary dynamics. C_LI

evolutionary biology↗