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Corbalan-Acedo, A.

Publications and source records attributed to Corbalan-Acedo, A..

2 recordsLinked to original sources

Phosphate Deficiency Attenuates SnRK1 Activity to Modulate the Phosphate Starvation Response in Arabidopsis thaliana

Phosphate starvation requires extensive metabolic and developmental reprogramming, yet how this response is coordinated with cellular energy status remains poorly understood. The energy sensor SnRK1 regulates plant growth and metabolism in response to energy availability, but its contribution to the regulation and deployment of the phosphate starvation response (PSR) remains unclear. To address this, we combined physiological, proteomic and metabolomic analyses with genetic manipulation of SnRK1 activity in Arabidopsis thaliana to determine how SnRK1 influences plant responses to phosphate starvation. We found that phosphate starvation reduced SnRK1 activity and activation-loop (T-loop) phosphorylation, while altering SnRK1 activity changed the timing and magnitude of physiological, proteomic and metabolic responses to phosphate limitation. Reduced SnRK1 activity was generally associated with earlier and stronger deployment of PSR-associated responses, whereas increased SnRK1 activity delayed or attenuated several components of the response. These effects were tissue- and time-dependent and were accompanied by distinct metabolic configurations. Our findings support a model in which SnRK1 acts as a quantitative metabolic brake on the PSR, coordinating the metabolic investment required for phosphate-starvation adaptation with growth.

plant biology↗

The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and 5' transcript length determination in Arabidopsis.

Eukaryotes have evolved multiple ATP-dependent chromatin remodelers to shape the nucleosome landscape. We recently uncovered an evolutionarily conserved SWItch/Sucrose Non-Fermentable (SWI/SNF) chromatin remodeler complex in plants reminiscent of the mammalian BAF subclass, which specifically incorporates the MINUSCULE (MINU) catalytic subunits and the TRIPLE PHD FINGERS (TPF) signature subunits. Here we report experimental evidence that establishes the functional relevance of TPF proteins for the complex activity. Our results show that depletion of TPF triggers similar pleiotropic phenotypes and molecular defects to those found in minu mutants. Moreover, we report the genomic location of MINU2 and TPF proteins as representative members of the plant BAF-like complex and their impact on nucleosome positioning and transcription. These analyses unravel the binding of the complex to thousands of genes where it modulates the position of the +1 nucleosome. These targets tend to produce 5-shifted transcripts in the tpf and minu mutants pointing to the participation of the complex in alternative transcriptional start site usage. Interestingly, there is a remarkable correlation between +1 nucleosome shift and 5 transcript length change suggesting their functional connection. In summary, this study unravels the function of a plant SWI/SNF complex involved in +1 nucleosome positioning and 5 transcript length determination.

molecular biology↗