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Coquille, S.

Publications and source records attributed to Coquille, S..

2 recordsLinked to original sources

Time-resolved functional rotation crystallography reveals protein dynamics and catalysis

Time-resolved crystallography offers a window into the transient, atomic-scale structural changes that underlie biological function. Here we introduce Time-Resolved Functional Rotation Crystallography (TR-FRX), a method that enables molecular-level studies of ligand binding and enzymatic catalysis using single protein crystals at room temperature. Unlike many state-of-the-art time-resolved methodologies, TR-FRX relies on standard rotation-based X-ray data collection and does not require serial sample delivery strategies. By dispensing nanoliter-scale droplets of ligand or substrate directly onto crystals mounted in conventional holders, TR-FRX captures real-time structural snapshots while maintaining experimental accessibility. As a proof-of-concept, we first monitor the binding of N-acetylglucosamine to hen egg-white lysozyme, demonstrating that TR-FRX can reveal ligand recognition in crystallo on sub-second timescales. We then resolve the bidirectional catalytic mechanism of a prototypical enzyme from the tricarboxylic-acid-cycle, revealing sequential cofactor and substrate binding, catalytic loop dynamics, and substrate stabilization across time points spanning from 137 milliseconds to minutes. Requiring only micrograms of protein and standard beamline infrastructure, TR-FRX provides an accessible methodology for capturing transient enzymatic states and enables 100-ms timescale studies at room temperature on single protein crystals.

biochemistry↗

Leigh Syndrome-inducing Mutations Affect LRPPRC / SLIRP Complex Formation

Mitochondria are essential organelles carrying their own genetic information which require specific gene expression processes. The leucine rich pentatricopeptide protein (LRPPRC) and its partner the SRA stem-loop interacting RNA binding protein (SLIRP) form a stable complex implicated in mRNA stability and polyadenylation. LRPPRC/SLIRP complex formation is still poorly characterized. We demonstrate that SLIRP interacts with the N-terminal region of LRPPRC in a RNA independent manner. We further show that the complex is stable in presence of high salt concentration. Point mutation and deletions found in the LRPPRC protein and responsible for the French-Canadian Leigh Syndrome (LSFC) are shown to affect complex formation in vitro. Our data are identifying the key region of LRPPRC involved in SLIRP association and showing the direct consequence of various LSFC mutations on the complex formation. Further experiments aiming at deciphering LRPPRC/SLIRP function(s) in vivo will benefit from our functional domain characterization.

biochemistry↗