bioRxiv Science⌕ Search

Biology subjects

Climer, J. R.

Publications and source records attributed to Climer, J. R..

2 recordsLinked to original sources

Hippocampal Representational Drift Persists in a Stable Multisensory Virtual Environment

Experiments tracking hippocampal place cells in mice navigating the same real environment have found significant changes in neural representations over days. However, there is currently a debate over whether such "representational drift" serves an intrinsic function, such as distinguishing similar experiences occurring at different times, or is instead observed due to subtle differences in the sensory environment or behavior. Here, we used the experimental control offered by a multisensory virtual reality (VR) system to determine that differences in sensory environment or behavior do not detectably change drift rate. We also found that the excitability of individual place cells was most predictive of their representational drift over subsequent days, with more excitable cells exhibiting less drift. These findings establish that representational drift occurs in mice even with highly reproducible environments and behavior and highlight neuronal excitability as a key factor of long-term representational stability.

neuroscience↗

Information theoretic approaches to deciphering the neural code with functional fluorescence imaging

Information theoretic metrics have proven useful in quantifying the relationship between behaviorally relevant parameters and neuronal activity with relatively few assumptions. However, these metrics are typically applied to action potential recordings and were not designed for the slow timescales and variable amplitudes typical of functional fluorescence recordings (e.g. calcium imaging). The lack of research guidelines on how to apply and interpret these metrics with fluorescence traces means the neuroscience community has yet to realize the power of information theoretic metrics. Here, we used computational methods to create mock action potential traces with known amounts of information. From these, we generated fluorescence traces and examined the ability of different information metrics to recover the known information values. We provide guidelines for how to use information metrics when applying them to functional fluorescence and demonstrate their appropriate application to GCaMP6f population recordings from mouse hippocampal neurons imaged during virtual navigation.

neuroscience↗