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Chiariello, A.

Publications and source records attributed to Chiariello, A..

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Identification of first-in-class small molecule potential inhibitor of GDF15

BackgroundGrowth Differentiation Factor 15 (GDF15), a mitokine implicated in stress response, has been associated with numerous diseases, particularly cancer cachexia. Many approaches, including monoclonal antibodies and peptide antagonists, have been implemented to inhibit GDF15 activity. It is currently unknown whether it is possible to inhibit GDF15 using small organic molecules (SOMs). MethodsA structure-based in silico screening workflow of a curated compound library was implemented to identify SOMs capable of binding to the monomeric or dimeric form of GDF15. The three top-ranking SOMs of each group were then tested in vitro on normal and cancer cells. ResultsAmong all tested SOMs, dioxoimidazolidin derivative named SOM D resulted capable of inhibiting GDF15 dimer formation and decreasing binding to GFRAL. Furthermore, it was found to be devoid of acute cytotoxicity both in normal cells (dermal fibroblasts, DFs) and tumor cells (OV90), to significantly slow proliferation and modify the expression of genes involved in GDF15 signaling or in cell cycle and senescence in OV90, but not in DFs. Interestingly, simultaneous treatment with SOMs and doxorubicin (doxo) failed in arresting the cell cycle compared to doxo alone. ConclusionsThe in silico screening has proven effective in identifying SOMs putatively capable of inhibiting GDF15, among which SOM D appears the most promising. Further characterizations will be necessary to better understand the exact mechanisms of action. Furthermore, the observation that SOMs have an opposite effect on proliferation in cancer versus normal cellular context suggests a dual role in cell-cycle control in presence of cancer aberration.

molecular biology↗

Connecting the Dots: PHF13 and cohesin promote polymer-polymer phase separation of chromatin into chromosomes

How interphase chromatin compacts into mitotic chromosomes has eluded researchers for over a century. Here we show that PHF13, a tightly regulated H3K4me epigenetic reader, and cohesin, a mediator of chromatin architecture, cooperate to drive polymer-polymer-phase-separation (PPPS) and higher order compaction of chromatin into chromosomes. PHF13 interacts with cohesin, shows similar dynamics during mitosis, and their co-depletion dramatically impairs mitotic condensation. Mechanistically, we demonstrate that PHF13 stabilizes cohesin chromatin interactions and that itself oligomerizes, resulting in a polymer with increased chromatin avidity and the ability to bridge neighboring and distant nucleosomes. Consistently, molecular dynamic simulations modelling the ability of PHF13 and cohesin to drive chromatin phase separations recapitulated our in vivo observations and are in line with 2-step condensation models.

cell biology↗