bioRxiv Science⌕ Search

Biology subjects

Challita, E. J.

Publications and source records attributed to Challita, E. J..

3 recordsLinked to original sources

Viscoelastic liquid lassos extend the defensive reach of termite soldiers

Small animals face a severe size asymmetry when defending themselves against larger predators. Soldiers of Nasutitermes termites overcome this constraint by ejecting tens of nanoliters of secretion through a cephalic nozzle, the nasus. High-speed imaging in the field, rheometry, micro-CT, flow simulation, behavioral assays, and scaled experiments reveal a multistage defense. A near-linear nasus and shear-thinning secretion support rapid ejection. Lateral head oscillation at 5-30 Hz couples with rope-coiling instability to distribute the filament as loops and meanders, a ``liquid lasso,'' reaching up to three body lengths. After deposition, the apparent extensional viscosity increases 8- 80-fold, delaying breakup as the secretion cures into a persistent adhesive. The lasso coats the sensory and grooming structures of predatory ants, and tethers them to the substrate. Synthetic experiments show that nozzle geometry, orientation, height, and oscillatory motion jointly control ejection and coverage, providing design principles for deploying small volumes of time-evolving viscoelastic materials.

biophysics↗

OpenCell: A Low-cost, Open-Source, 3-in-1 device for DNA Extraction

High-cost DNA extraction procedures pose significant challenges for budget-constrained laboratories. To address this, we introduce OpenCell, an economical, open-source, 3-in-1 laboratory device that combines the functionalities of a bead homogenizer, a microcentrifuge, and a vortex mixer. OpenCell utilizes modular attachments that magnetically connect to a central rotating brushless motor. This motor couples to an epicyclic gearing mechanism, enabling efficient bead homogenization, vortex mixing, and centrifugation within one compact unit. OpenCells design incorporates multiple redundant safety features, ensuring both the devices and operators safety. Additional features such as RPM measurement, programmable timers, battery operation, and optional speed control make OpenCell a reliable and reproducible laboratory instrument. In our study, OpenCell successfully isolated DNA from Spinacia oleracea (spinach), with an average yield of 2.3 {micro}g and an A260/A280 ratio of 1.77, demonstrating its effectiveness for downstream applications such as Polymerase Chain Reaction (PCR) amplification. With its compact size (20 cm x 28 cm x 6.7 cm) and lightweight design (0.8 kg), comparable to the size and weight of a laptop, OpenCell is portable, making it an attractive component of a lab-in-a-backpack for resource-constrained environments in low-and-middle-income countries and synthetic biology in remote field stations. Leveraging the accessibility of 3D printing and off-the-shelf components, OpenCell can be manufactured and assembled at a low unit cost of less than $50, providing an affordable alternative to expensive laboratory equipment costing over $4000. OpenCell aims to overcome the barriers to entry in synthetic biology research and contribute to the growing collection of frugal and open hardware.

bioengineering↗

The ultrafast snap of a finger is mediated by skin friction

The snap of a finger has been used as a form of communication and music for millennia across human cultures. However, a systematic analysis of the dynamics of this rapid motion has not yet been performed. Using high-speed imaging and force sensors, we analyze the dynamics of the finger snap. Our analysis reveals the central role of skin friction in mediating the snap dynamics by acting as a latch to control the resulting high velocities. We evaluate the role of this frictional latch experimentally, by covering the thumb and middle finger with different materials to produce different friction coefficients and varying compressibility. In doing so, we reveal that the compressible, frictional latch of the finger pads likely operate in a regime optimally tuned for both friction and compression. We also develop a soft, compressible friction-based latch-mediated spring actuated (LaMSA) model to further elucidate the key role of friction and how it interacts with a compressible latch. Our mathematical model reveals that friction plays a dual role in the finger snap, both aiding in force loading and energy storage while hindering energy release. Our work reveals how friction between surfaces can be harnessed as a tunable latch system and provide design insight towards the frictional complexity in many robotics and ultra-fast energy-release structures.

biophysics↗