Biology subjects

Castejon-Vega, B.

Publications and source records attributed to Castejon-Vega, B..

6 recordsLinked to original sources

bioRxiv2026

Barcoding biology: Chemotype predicts variation in genotype, physiology, and stress response

Predicting biological responses to perturbations such as stress, nutrition, or pharmaceuticals could transform healthcare and biosciences. The task is challenging because complex interactions among many factors interactively drive biological variation, and thereby alter responses. However, metabolism integrates these drivers of variation, suggesting that emergent biological states may be reflected in aggregate chemical states. We define such states as chemotypes and test their predictive utility. Using Fourier-transform infrared (FTIR) spectroscopy coupled with machine learning in Drosophila melanogaster, we show that chemotypes serve as proxies for biological variation driven by sex, genotype, nutrition and age, and - critically - predict among-population variation in stress response. These findings indicate that chemotypes provide a computable and integrative representation of organismal biology, predicting genotype, phenotype, and response to perturbation.

systems biology↗

bioRxiv2023

Developmental mitochondrial Complex I activity determines lifespan

Aberrant mitochondrial function has been associated with an increasingly large number of human disease states. Observations from in vivo models where mitochondrial function is altered suggest that adaptations to mitochondrial dysfunction may underpin disease pathology. We hypothesized that the severity of these maladaptations could be shaped by the plasticity of the system when mitochondrial dysfunction manifests. To investigate this, we have used inducible fly models of mitochondrial complex I (CI) dysfunction to reduce mitochondrial function at two stages of the fly lifecycle, from early development and adult eclosion. Here, we show that in early life (developmental) mitochondrial dysfunction results in severe reductions in survival and stress resistance in adulthood, while flies where mitochondrial function is perturbed from adulthood, are long-lived and stress resistant despite having up to an 75% reduction in CI activity. After excluding developmental defects as a cause, we went on to molecularly characterize these two populations of mitochondrially compromised flies, short- and long-lived. We find that our short-lived flies have unique transcriptomic and metabolomic responses which overlap significantly in discreet models of CI dysfunction. Our data demonstrate that early mitochondrial dysfunction via CI depletion elicits an adaptive response which severely reduces survival, while CI depletion from adulthood is not sufficient to reduce survival and stress resistance.

molecular biology↗

bioRxiv2023

The Role of Respiratory Complex IV in Lifespan Length and Quality

The contribution of mitochondria to lifespan determination remains controversial, as impaired mitochondrial function can paradoxically both shorten and extend longevity. During ageing, mitochondria accumulate defects that disrupt electron transport and elevate the production of reactive oxygen species (ROS) per unit of ATP. Here, we developed Drosophila melanogaster models carrying mitochondria that phenocopy aged organelles--termed "aged-like" mitochondria--to dissect the developmental versus adult contributions of mitochondrial dysfunction to lifespan regulation. Inducing aged-like mitochondria during development caused profound metabolic maladaptation and markedly reduced adult lifespan, without signs of accelerated ageing. In contrast, restricting their expression to adulthood resulted in only a modest reduction in lifespan, accompanied by an increased mortality rate, indicative of accelerated ageing. Enhancing mitochondrial function exclusively during development by expressing the alternative oxidase (AOX) mitigated these metabolic defects and significantly extended adult survival. Likewise, developmental overexpression of Rheb, an activator of Target of Rapamycin (TOR) signalling, improved adult survival without restoring mitochondrial respiration. Finally, we show that mitochondrial respiratory capacity cannot be reinstated in adults with "aged-like" mitochondria, as oxidative phosphorylation (OXPHOS) protein levels are largely established during development and remain stable throughout adult life. We propose that Drosophila permanently tunes adult metabolism according to developmental cues to optimise reproductive fitness, at the expense of long-term survival.

molecular biology↗

bioRxiv2021

L-arginine ameliorates defective autophagy in GM2 gangliosidoses by mTOR modulation

Tay-Sachs and Sandhoff diseases (GM2 gangliosidosis) are autosomal recessive disorders of lysosomal function that cause fatal and progressive neurodegeneration in infants and young children. Impaired hydrolysis catalysed by {beta}-hexosaminidase A (HexA) leads to the accumulation of its specific substrate, GM2 ganglioside, in neuronal lysosomes. Despite the development of a florid storage phenotype, the role of autophagy and its regulation by the mammalian target of rapamycin (mTOR) has yet to be explored in the neuropathogenesis. Accordingly, we investigated the effects on autophagy and lysosomal integrity using skin fibroblasts obtained from patients with Tay-Sachs and Sandhoff diseases. Pathological autophagosomes, with enhanced expression of the p62/SQSTM1 protein, suggested impaired autophagic flux, an abnormality confirmed by electron microscopy and biochemical studies revealing the accelerated release of mature cathepsins and HexA into the cytosol, indicating increased lysosomal permeability. GM2 fibroblasts showed inappropriately diminished mTOR signalling with reduced basal mTOR activity. Accordingly, provision of a positive nutrient signal by L-arginine supplementation partially restored mTOR activity and ameliorated the cytopathological abnormalities - and immediately suggests an avenue for therapeutic exploration in this cruel disease. We also contend that the expression of autophagy/lysosome/mTOR-associated molecules may prove useful peripheral biomarkers for facile monitoring of systemic treatment of GM2 gangliosidosis and neurodegenerative disorders that affect the lysosomal function and disrupt autophagy

cell biology↗

bioRxiv2020

NLRP3 inflammasome inhibition rescues Hutchinson-Gilford Progeria cellular phenotype and extend longevity of an animal model

Inflammation is a hallmark of aging and accelerated aging syndromes. In this context, inflammation has been associated to the pathophysiology of Hutchinson-Gilford progeria syndrome (HGPS). In this study, we report that progeroid skin fibroblasts and animal models present an hyperactivation of the NLRP3-inflammasome complex. High expression of NLRP3 and caspase 1 was also observed in skin fibroblasts from HGPS associated to the nuclei morphology. Lymphoblast from HGPS also showed increased basal levels of NLRP3 and caspase 1 independent to the induction from metabolic factors. Consistent with these results, Zmpste24-/- showed high expression of Nlrp3 and caspase 1 in heart, liver and kidney and reduced levels of Nlrc3, however these changes were not observed in other inflammasomes. We also show that pharmacological inhibition of NLRP3 using a direct NLRP3 inhibitor, MCC950, improved cellular phenotype, significantly extends the lifespan of these progeroid animals and reduced inflammasome-dependent inflammation. These findings suggest the NLRP3-inflammasome comples as a therapeutic approach for patients with HGPS.

immunology↗

bioRxiv2020

Inhibition of the NLRP3 inflammasome prevents ovarian aging

Inflammation is a hallmark of many processes during aging and reproductive physiology, negatively affecting female fertility. The goal of this study was to evaluate the role of the NLRP3 inflammasome in ovarian aging and female fertility. Age-dependent increased expression of NLRP3 in the ovary was observed in female WT mice during reproductive aging. High expression of NLRP3, caspase 1 and IL-1{beta} was also observed in granulosa cells from patients with primary ovarian insufficiency. Ablation of the NLRP3 inflammasome improved the survival and pregnancy rates in mice, increased hormonal levels of AMH, a biochemical marker of ovarian reserve, and autophagy rates in ovarian tissue. Deficiency of the NLRP3 inflammasome also reduced serum FSH and estradiol levels. Consistent with these results, pharmacological inhibition of NLRP3 using a direct NLRP3 inhibitor, MCC950, improved fertility in female mice to levels comparable to those of Nlrp3-/- mice. These results suggest that the NLRP3 inflammasome is implicated in the age-dependent loss of female fertility and position this inflammasome as a potential new therapeutic target for the treatment of infertility.

immunology↗