bioRxiv Science⌕ Search

Biology subjects

Carr, K.

Publications and source records attributed to Carr, K..

2 recordsLinked to original sources

Stabilization of a Protein by a Single Halogen-Based Aromatic Amplifier

The utility of halogenation in protein design is investigated by a combination of quantitative atomistic simulations and experiment. The approach is applied to insulin, a small, therapeutically relevant domain amenable to simulation and semi-synthesis. In a singly halogenated aromatic ring, the simulations predicted regiospecific inductive effects to modulate multiple surrounding electrostatic (weakly polar) interactions, thereby amplifying changes in thermodynamic stability. In accordance with the simulations, stabilization of insulin is demonstrated by single halogen atoms at the ortho position of an invariant phenylalanine (2-F-PheB24, 2-Cl-PheB24 and 2-Br-PheB24; {Delta}{Delta}Gu = -0.5 to -1.0 kcal/mol) located at the edge of a protein crevice. Corresponding meta and para substitutions have negligible effects. The ortho-modified insulin analogs exhibit enhanced resistance to fibrillation above room temperature and retain biological activity in mammalian cells and in a rat model of diabetes mellitus. Consequently, halogen-based stabilization of insulin and other therapeutic proteins may provide a biophysical strategy to circumvent the requirement for a distribution "cold chain" in the developing world and enhance the shelf life of pharmaceutical formulations.

biochemistry↗

Magnetic resonance spectroscopy analysis of intramyocellular lipid composition in lipodystrophic patients and athletes

ContextParadoxically, intramyocellular lipid (IMCL) accumulation has been linked to both insulin-resistant and to insulin-sensitive (athletes) states. The composition of this lipid store is unknown in these states.\n\nDesign and MethodsWe used a recently validated and potentially widely applicable 1H magnetic resonance spectroscopy method to compare the compositional saturation index (CH2:CH3 ratio) and concentration independent of composition (CH3) of intramyocellular lipid in the soleus and tibialis anterior muscles of 16 female insulin-resistant lipodystrophic patients with that of age- and gender-matched athletes (n=14) and healthy controls (n = 41).\n\nMain OutcomeIMCL compositional saturation index (CH2:CH3 ratio).\n\nResultsThe IMCL CH2:CH3 ratio was significantly higher in both muscles of the lipodystrophic patients compared with age- and gender-matched controls but not compared to athletes. IMCL CH2:CH3 was dependent on IMCL concentration in the controls and after adjusting the composition index for quantity (CH2:CH3adj) was able to distinguish patients from athletes. With groups pooled, this CH2:CH3adj marker had the strongest relation to insulin resistance (HOMA-IR) compared to other measures of lipid concentration and composition, especially in the soleus muscle. Contrary to the athletes paradox, IMCL in athletes was similar in tibialis anterior (p>0.05) and significantly lower in the soleus (p < 0.004) compared to both controls and patients.\n\nConclusionsThe IMCL saturation index adjusted for quantity, which likely reflects accumulation of saturated IMCL, is more closely associated with insulin resistance than concentration alone.

biochemistry↗