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Bryce, N.

Publications and source records attributed to Bryce, N..

2 recordsLinked to original sources

Topological structure in human spatial representation revealed through drawing

Human spatial representations are often assumed to represent Euclidean properties such as length, distance, and angle. Here we test an alternative (but not mutually exclusive) possibility - that spatial memory is structured primarily around topological relations. Across four experiments, adults and children memorized simple letter-like figures and reproduced them by drawing, allowing the contents of their spatial representations to be revealed directly. Drawings showed systematic distortions of metric features, including strong biases of angles toward 90{degrees} and compression of line length towards an average value. In contrast, topologically critical features - such as T-junctions and holes - were reliably preserved, even relative to closely matched but topologically irrelevant features like L-junctions. These effects were magnified in a serial reproduction paradigm, in which participants iteratively generated new drawings from previous participant drawings: At the end of each mnemonic chain, figures converged on simplified topological structures as metric detail degraded. Similar patterns were observed in children aged five to eight years. Together, these findings suggest that basic topological relations may function as primitive building blocks of human spatial representation, with metric detail encoded secondarily.

animal behavior and cognition↗

APEX-Gold: A genetically-encoded particulate marker for robust 3D electron microscopy

Genetic tags allow rapid localization of tagged proteins in cells and tissues. APEX, an ascorbate peroxidase, has proven to be one of the most versatile and robust genetic tags for ultrastructural localization by electron microscopy. Here we describe a simple method, APEX-Gold, which converts the diffuse oxidized diaminobenzidine reaction product of APEX into a silver/gold particle akin to that used for immunogold labelling. The method increases the signal to noise ratio for EM detection, providing unambiguous detection of the tagged protein, and creates a readily quantifiable particulate signal. We demonstrate the wide applicability of this method for detection of membrane proteins, cytoplasmic proteins and cytoskeletal proteins. The method can be combined with different electron microscopic techniques including fast freezing and freeze substitution, focussed ion beam scanning electron microscopy, and electron tomography. The method allows detection of endogenously expressed proteins in genome-edited cells. We make use of a cell-free expression system to generate membrane particles with a defined quantum of an APEX-fusion protein. These particles can be added to cells to provide an internal standard for estimating absolute density of expressed APEX-fusion proteins.

cell biology↗