bioRxiv Science⌕ Search

Biology subjects

Bringloe, T.

Publications and source records attributed to Bringloe, T..

2 recordsLinked to original sources

Thriving to surviving: light wavelength modulates photoacclimation response in the siphonous green alga Derbesia

Algae require specific acclimation strategies to cope with spectral variability in shallow marine habitats. We investigated how the siphonous green alga Derbesia alters its photosynthetic and metabolic processes under white (WL), blue (BL), green (GL), red (RL), and far-red light (FL) by conducting photobiological and transcriptomic sampling over a 10-day period. Our results show two contrasting photoacclimation strategies: BL and GL promoted metabolic activity associated with growth, whereas FL and RL induced a low-light-like survival strategy characterized by reduced growth and suppression of the core metabolism. Photosynthetic acclimation across all conditions primarily occurs within the light dependent reactions. BL and GL promoted early acclimation marked by the immediate activation of light-harvesting complexes (LHCs) and a key transcriptional regulator MYB, and showed better acclimation marked by the sustained activation of ATPases, ATP transporters, and hormone-signaling components. BL induced a distinct transcriptional shift during the transition to prolonged exposure, including enhanced cyclic electron transport, and key regulators of protein synthesis, DNA replication, and transcriptional regulation. In contrast, FL, and to a lesser extent RL, triggered responses resembling low light acclimation with constrained growth, characterized by inefficient energy utilization, enlarged antenna systems, chloroplast proliferation with aggregations, and reduced growth rates. This study suggests high accumulation of core photopigments and reduction in chlorophyll a/b is an acclimatory response to FL, and consistently higher activation of core metabolic processes under WL likely indicates the evolutionary adaptation of Derbesia to shallow coastal environments where broad-spectrum light predominates. Additionally, our newly sequenced draft genome of the Derbesia strain for this study could serve as a genomic resource for future molecular photobiology research in Bryopsidales algae.

ecology↗

Extensive nuclear datasets resolve the phylogeny of siphonous green algae and identify genome duplications as a contributing factor to evolutionary adaptations

The Bryopsidales, a group of siphonous green algae, are of particular evolutionary interest due to their unusual cellular organization and striking morphological and ecological diversity. There are indications for genome duplication, but low taxon sampling has limited our insights of these processes and how they may contribute to these traits. The relationships among certain bryopsidalean lineages remain unresolved, even with plastid genome-scale datasets. Nuclear genomes offer promise for resolving phylogenetic uncertainties and pinpointing duplication events, but progress has been hindered by the limited availability of such datasets. Here, we present new nuclear genome data for 44 taxa sampled across the phylogenetic breadth of Bryopsidales, and conduct phylogenomic analyses of 708 nuclear genes with coalescent and concatenation approaches. Our results significantly advance the resolution of Bryopsidales relationships, including confident placement of previously hard-to-resolve lineages like Pseudobryopsis, Ostreobineae and the Halimedineae tribes. We identified many ancient gene duplications across the Bryopsidales tree, including potential whole genome duplications in the Ostreobiaceae and Caulerpaceae. Our work presents the most highly-resolved phylogeny of Bryopsidales to date and offers an extensive framework for the exploration of the potential roles of genome duplications that may have facilitated niche adaptations and invasive trait development.

evolutionary biology↗