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Bowman, C.

Publications and source records attributed to Bowman, C..

2 recordsLinked to original sources

Detection of arterial wall abnormalities via Bayesian model selection

Patient-specific modeling of hemodynamics in arterial networks has so far relied on parameter estimation for inexpensive or small-scale models. We describe here a Bayesian uncertainty quantification framework which makes two major advances: an efficient parallel implementation, allowing parameter estimation for more complex forward models, and a system for practical model selection, allowing evidence-based comparison between distinct physical models. We demonstrate the proposed methodology by generating simulated noisy flow velocity data from a branching arterial tree model in which a structural defect is introduced at an unknown location; our approach is shown to accurately locate the abnormality and estimate its physical properties even in the presence of significant observational and systemic error. As the method readily admits real data, it shows great potential in patient-specific parameter fitting for hemodynamical flow models.

bioengineering

EMHP: An accurate automated hole masking algorithm for single-particle cryo-EM image processing

1. Introduction 1. Introduction 2. Software Package Overview 3. Conclusions Funding References The recent surge in popularity of single-particle cryo-EM as a tool for molecular structure determination alongside advances in software that have reduced the computational infrastructure needed to process single-particle datasets (Kimanius et al, 2016) have created the need for a more streamlined suite of tools to locally facilitate initial data treatment and make processing more attainable at the workstation level.\n\nCurrent technical limitations inherent to the process of structure determination via single-particle cryo-EM require collecting very large data sets - often several thousands of images. This task is facilitated by automated imaging software, however downstream preprocessing steps such as quality asses ...

bioinformatics