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Bouche, A.

Publications and source records attributed to Bouche, A..

2 recordsLinked to original sources

Quantifying the effect of forest edge on tropical fauna using explainable ecoacoustics metrics

Tropical forests are biodiversity hotspots but increasingly fragmented by human activities, multiplying forest edges that alter microclimates and species dynamics. While edge effect on plants is well documented, its impact on fauna remains less ex-plored. Ecoacoustics provides a non-invasive and passive approach to monitor faunal communities, yet the complexity of soundscapes and the opacity of machine learning tools often limit ecological interpretability. Here, we show that acoustic diversity in New Caledonian ultramafic forests exhibits a detectable edge effect, with sound-scapes converging towards homogeneity starting 100 m from the forest edge. Using passive acoustic monitoring and 59 ecoacoustic indices, we combined machine learn-ing, Representational Similarity Analysis, and explainable statistical methods from psychophysics. Results reveal a significant correlation between distance to edge and acoustic diversity, particularly pronounced during day-time. Indices such as NDSI, Hf, and SKEWf contributed most to detecting the effect, whereas some other in-dices added noise rather than informative signal. These findings match the botanical threshold described by Blanchard et al. (2023) and highlight both the promise and limitations of indice-based ecoacoustics. By integrating explicability methods, we offer a transparent framework to disentangle complex ecological signals, advancing ecoacoustics as a pertinent tool for studying forest fragmentation and guiding biodi-versity conservation.

ecology↗

Intracellular autofluorescence enables the isolation of viable, functional human muscle reserve cells with distinct Pax7 levels and stem cell states.

BackgroundHuman muscle reserve cells (MuRC) represent a quiescent MuSC population generated in vitro that exhibit heterogeneous Pax7 expression, with a Pax7High subset in a deeper quiescent state. However, conventional identification of Pax7High cells requires intracellular staining, limiting their viability for functional studies. This study investigates autofluorescence (AF) as a potential biomarker to identify functionally distinct human MuRC subpopulations. MethodsHuman myoblasts (MB) and MuRC were analysed for AF by fluorescence microscopy and flow cytometry. Cellular metabolic composition was assessed by NADH/NADPH quantification and lipid staining. Human MuRC subpopulations were sorted by AF intensity and analysed for Pax7 expression, cell cycle re-entry, proliferation, clonal expansion, and myogenic differentiation. In vivo transplantation of MuRC-AFHigh and MuRC-AFLow populations into immunodeficient mice assessed survival and regenerative potential using bioluminescence imaging and immunohistochemistry. ResultsHuman MuRC showed a 3-fold increase in mean fluorescence intensity compared to MB, with AF peak at 405 nm excitation. Lipid staining revealed a 1.6-fold increase in lipid content in MuRC, while NADH/NADPH levels were similar between MB and MuRC. Flow cytometry identified MuRC-AFHigh as a Pax7High-enriched subpopulation. Functionally, MuRC-AFHigh cells exhibited delayed cell cycle re-entry and slower proliferation but retained differentiation potential. In vivo, both MuRC-AFHigh and MuRC-AFLow survived transplantation with no significant differences in engraftment efficiency. They contributed to the generation of human Pax7 positives MuSC and both subpopulations retain their regenerative capacity upon re-injury. ConclusionAF allows the identification of human MuRC subsets, with the AFHigh subpopulation associated with increased lipid content. MuRC-AFHigh cells are enriched in Pax7High cells and show delayed activation, slower proliferation and comparable engraftment efficiency to the AFLow subpopulation. These findings provide a novel perspective on AF as a potential biomarker to identify functionally distinct muscle progenitor subsets and highlight its relevance in muscle regeneration research.

cell biology↗