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Bertrand, R.

Publications and source records attributed to Bertrand, R..

7 recordsLinked to original sources

Connexin-43 links Neuromesodermal progenitor states to segmentation clock robustness during vertebrate axis elongation

Neuromesodermal progenitors (NMPs) sustain vertebrate body-axis elongation by generating both neural and paraxial mesodermal tissues. Although signaling and metabolic pathways regulate NMP states, whether intercellular communication contributes to the coordination of progenitor behaviour and developmental timing remains unclear. Here, we identify GJA1, encoding connexin-43 (Cx43), as a gene dynamically enriched within the neuromesodermal competent domain of the chick embryo. Cx43-associated channels and hemichannels accumulate preferentially within the NMP population, and a photoactivatable tracer assay demonstrates enhanced connexin-mediated exchange within the posterior growth zone. Pharmacological inhibition of hemichannels or gap junctions revealed distinct contributions of these communication modes to transcriptional regulation across the NMP continuum. Gap-junction inhibition primarily altered SOX2 expression within progenitor populations, whereas hemichannel inhibition selectively affected TBXT expression in mesodermal cells. Connexin inhibition also reduced the relative size of the progenitor compartment and altered the spatial organization of newly formed somites. Strikingly, disruption of connexin-mediated communication impaired segmentation dynamics, leading to increased frequencies of off-pace segmentation events, accelerated segmentation timing and progressive deviation from the expected segmentation program. These defects emerged rapidly and accumulated over successive segmentation cycles, indicating a requirement for connexin activity in maintaining developmental robustness. Together, our findings identify connexin-43 as a regulator of neuromesodermal progenitor states and reveal a previously unrecognized link between intercellular communication and segmentation clock robustness during vertebrate axis elongation.

developmental biology↗

Warming and predation drive rapid evolution of ecosystem functioning but not functional traits

Global environmental change can rapidly reshape phenotypic trait distributions through adaptive and neutral processes. Yet, disentangling their relative contributions remains a major challenge, particularly for traits underpinning ecosystem functioning. Using a two-year mesocosm study, we experimentally evolved Asellus aquaticus under contrasting temperature and predation regimes to test how the joint influence of these global change pressures shape the evolution of traits and ecosystem functioning. We show that classic functional traits (body size and metabolic rate) showed no evidence of divergent evolution across evolutionary conditions, while ecosystem function itself, namely decomposition rate, has evolved rapidly and differently depending on evolutionary conditions, with the highest decomposition rate observed for Asellus populations exposed to high temperatures in the absence of their predator. A Pst/Fst comparison revealed that divergence in metabolic rate among evolutionary conditions was mainly driven by genetic drift, whereas, for body mass and decomposition rate, non-neutral processes (natural selection and/or plasticity) were also involved, albeit in a different way. By demonstrating that predation and temperature can influence the evolution of an ecosystem function over a few generations, this study represents an important first step toward uncovering the combined effects of global change on the eco-evolutionary dynamics of ecosystems.

evolutionary biology↗

Adenine methylation is very scarce in the drosophila genome and not erased by the Ten Eleven Translocation dioxygenase.

N6-methyladenine (6mA) DNA modification has recently been described in metazoans, including in drosophila, for which the erasure of this epigenetic mark has been ascribed to the Ten Eleven Translocation (TET) enzyme. Here, we re-evaluated 6mA presence and TET impact on drosophila genome. Using axenic or conventional breeding conditions, we found traces of 6mA by LC-MS/MS and no significant increase in 6mA levels in the absence of TET, suggesting that this modification is present at very low levels in the drosophila genome but not regulated by TET. Consistent with this latter hypothesis, further molecular and genetic analyses showed that TET does not demethylate 6mA but acts essentially in an enzymatic-independent manner. Our results call for further caution concerning the role and regulation of 6mA DNA modification in metazoans and underline the importance of TET non-enzymatic activity for fly development.

molecular biology↗

Prodomain-driven enzyme dimerization, a potent pH-dependent autoinhibition mechanism to control Plasmodium Sub1 subtilisin-like activity prior to prime merozoite egress

Malaria symptoms are associated with the asexual multiplication of Plasmodium falciparum within human red blood cells (RBC) and fever peaks coincide with the egress of daughter merozoites following the rupture of the parasitophorous vacuole (PV) and the RBC membranes (RBC). Over the last two decades it has emerged that the release of competent merozoites is tightly regulated by a complex cascade of events, including the unusual multi- step activation mechanism of the pivotal subtilisin-like protease 1 (Sub1) that takes place in three different cellular compartments and remains poorly understood. Following an initial auto- maturation in the Endoplasmic Reticulum (ER) between its pro- and catalytic domains, the Sub1 prodomain (PD) undergo further cleavages by the parasite aspartic protease plasmepsin X (PmX) within acidic secretory organelles that ultimately lead to full Sub1 activation upon discharge into the parasitophorous vacuole (PV). Here we report the crystal structure of full- length P. falciparum Sub1 (PfS1FL) and demonstrate, through structural, biochemical and biophysical studies, that the atypical Plasmodium-specific Sub1 PD directly triggers the assembly of inactive enzyme homodimers at acidic pH, whereas Sub1 is primarily monomeric at neutral pH. Our results shed new light into the finely tuned Sub1 spatiotemporal activation during secretion, particularly the different compartmentalization of PmX processing and full Sub1 activation, and uncover a robust mechanism of pH-dependent subtilisin autoinhibition involved in the tight regulation of P. falciparum merozoites egress from host infected cells. SignificanceMalaria fever spikes are due to the rupture of infected erythrocytes, allowing the egress of Plasmodium sp. merozoites and further parasite propagation. This fleeting tightly regulated event involves a cascade of enzymes, culminating with the complex activation of the subtilisin- like protease 1, Sub1. Differently than other subtilisins, Sub1 activation strictly depends upon the processing by a parasite aspartic protease within acidic merozoite secretory organelles. However, Sub1 biological activity is requested in the pH neutral parasitophorous vacuole, to prime effectors involved in the rupture of the vacuole and erythrocytic membranes. Here we show that the unusual, parasite specific Sub1 prodomain is directly responsible for its acidic- dependent dimerization and autoinhibition, required for protein secretion, before its full activation at neutral pH in a monomeric form. pH-dependent Sub1 dimerization defines a novel, essential regulatory element involved in the finely tuned spatiotemporal activation of the egress of competent Plasmodium merozoites.

microbiology↗

Species better track the shifting isotherms in the oceans than on lands

Despite mounting evidence of species redistribution as climate warms, our knowledge of the coupling between species range shifts and isotherm shifts is limited. Compiling a global geo-database of 30,534 range shifts from 12,415 taxa, we show that only marine taxa closely track the shifting isotherms. In the oceans, the velocity of isotherm shifts interacts synergistically with anthropogenic disturbances and baseline temperatures such that isotherm tracking by marine life happens either in warm and undisturbed waters (e.g. Central Pacific Basin) or in colder waters where human activities are more pronounced (e.g. North Sea). On lands, increasing anthropogenic activities and temperatures negatively impact the capacity of terrestrial taxa to track isotherm shifts in latitude and elevation, respectively. This suggests that terrestrial taxa are lagging behind the shifting isotherms, most likely due to their wider thermal safety margin, more constrained physical environment for dispersal and higher availability of thermal microrefugia at shorter distances.

ecology↗

Unequal contributions of species’ persistence and migration on plant communities’ response to climate warming throughout forests

Community reshuffling is lagging behind climate warming for many taxa, thereby generating a climatic debt. However, only few studies have attempted to assess the underlying factors that explain this debt, and none has gone further to explore this issue from a biogeographical perspective. Here I examine how effects of species migration and persistence on the current climatic debt vary spatially in forest herbaceous communities throughout the French territory. I show that Mediterranean communities are responding to climate warming through both high species migration and persistence effects, while alpine forest is the only ecosystem where species migration overtakes species persistence mechanisms. Such an approach seems promising in assessing the underlying mechanisms of the biodiversity response to climate change locally, and it can be applied for conservation issues to assess biodiversity sensitivity and optimize its management.

ecology↗

Decreasing before increasing: Evolution of nitrogen availability conditions in French forest ecosystems over the last century according to forest herbs

O_LINitrogen (N) is a key nutrient elements for ecosystems which has been highly impacted by human development and activities since the early 20th century. Despite that changes in N-availability have been demonstrated to impact forests, we still miss evidence of its effect on species composition over the long-term.\nC_LIO_LIBased on a large number of floristic observations (n = 45 604), the French forest status related to soil N-availability was reconstructed from herb species assemblage between 1910 and 2010 using both a bioindication approach and a spatiotemporal sampling aiming to pair past and recent floristic observations.\nC_LIO_LIWe showed that soil N content bioindicated from forest herb communities was higher at the start of the 20th century than over the 2005-2010 period. It decreased more or less continuously until 1975 and 2005 in coniferous (mean {Delta}C:N=+0.79) and broadleaved (mean {Delta}C:N=+0.74) forests, respectively, and then was lower than the most recent bioindicated N level observed over the 2005-2010 period (mean {Delta}C:N=-0.10 and -0.16, respectively). Spatial analysis confirmed the temporal trends with a decrease and increase in forest surface areas where soil N impoverishment and enrichment have been bioindicated over the time, respectively.\nC_LIO_LIN bioindicated trends are opposite to changes in N atmospheric deposition compared the 2005-2010 period, while they follow temporal variation in mean N deposition until 1990.\nSynthesis. Our results showed that forest herb communities have been reshuffled in regards of their soil N requirements over the 20th century highlighting that temporal changes in soil N supply have impacted the understory species composition of forest. We evidenced changes in communities towards less nitrophilous plant assemblage followed by a recent eutrophication since 2005. We propose that the nitrogen forest vegetation status is likely related to N atmospheric deposition trend, but also to both acidification, climate change and forestry management which impacted organic matter decomposition and soil N mineralization through effects on soil microbial and fauna activities. The current eutrophication observed in forest herb communities is worrisome for temperate forest ecosystem and its functioning in regards of biodiversity homogenization which often accompanied such a community reshuffling.\nC_LI

ecology↗