bioRxiv Science⌕ Search

Biology subjects

Bersch, B.

Publications and source records attributed to Bersch, B..

3 recordsLinked to original sources

A dynamic displacement mechanism drives protein import into mitochondria

Most mitochondrial proteins are produced in the cytosol and imported through the translocase of the outer mitochondrial membrane (TOM) to reach their final destination. Although this protein entry gate has been structurally characterized, it remains unclear how precursor proteins are handed off from the cytosolic receptor domains to the translocation pore. Here we show that the cytosolic domain of Tom22--traditionally viewed as the central TOM receptor--acts not as a structured scaffold but as a largely disordered, flexible segment that plays an active role in precursor transfer. Atomic-level structural techniques and in vivo experiments identified a conserved short linear motif that forms a transient !-helical element within this disordered domain. By binding to the canonical precursor protein binding sites of the receptors Tom20 and Tom70, this critical -helical segment acts as a precursor protein displacement element (PPDE). This competitive interaction facilitates the release of preproteins directly above the import pore, and thereby drives translocation across the outer mitochondrial membrane. These findings reveal that flexibility, rather than rigid structure, underlies the central transfer step of mitochondrial outermembrane protein translocation. Our results point to a versatile mechanism for ligand displacement in chaperone, receptor, and transport systems that must balance selective binding with efficient release.

cell biology↗

Structural basis of client specificity in mitochondrial membrane-protein chaperones

Chaperones are essential for assisting protein folding, and for transferring poorly soluble proteins to their functional locations within cells. Hydrophobic interactions drive promiscuous chaperone-client binding, but our understanding how additional interactions enable client specificity is sparse. Here we decipher what determines binding of two chaperones (TIM8{middle dot}13, TIM9{middle dot}10) to different integral membrane proteins, the alltransmembrane mitochondrial carrier Ggc1, and Tim23 which has an additional disordered hydrophilic domain. Combining NMR, SAXS and molecular dynamics simulations, we determine the structures of Tim23/TIM8{middle dot}13 and Tim23/TIM9{middle dot}10 complexes. TIM8{middle dot}13 uses transient salt bridges to interact with the hydrophilic part of its client, but its interactions to the trans-membrane part are weaker than in TIM9{middle dot}10. Consequently, TIM9{middle dot}10 is outcompeting TIM8{middle dot}13 in binding hydrophobic clients, while TIM8{middle dot}13 is tuned to few clients with both hydrophilic and hydrophobic parts. Our study exemplifies how chaperones fine-tune the balance of promiscuity vs. specificity.

biophysics↗

Dynamics and interactions of ADP/ATP transporter AAC3 in DPC detergent are not functionally relevant

A recent study1 used solution-state NMR spectroscopy to examine the interactions and dynamics of the yeast mitochondrial inner-membrane ADP/ATP carrier, yAAC3. Crystal structures of different AACs, including yAAC3, in a conformation locked with a strong inhibitor (CATR) had been determined before. This putative \"c-state\"2,3 is believed to represent one extreme conformation of an alternating access mechanism, which involves a further and yet elusive second state termed \"m-state\". Characterizing the dynamics between these states is of paramount importance to understand the transport mechanism. The authors refolded yAAC3 from inclusion bodies in the detergent dodecylphosphocholine (DPC), and observed micro-to-millisecond (s-ms) motion in part of yAAC3 using CPMG NMR experiments. The authors propose that this asymmetrically distributed dynamics, involving residues located in thr ...

biophysics↗