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Belles, X.

Publications and source records attributed to Belles, X..

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ERGA-BGE Reference Genome of Loboptera subterranea: a cave adapted cockroach endemic to the Canary Islands

Species of the genus Loboptera from the Canary Islands are adapted to life in subterranean environments, except Loboptera canariensis and Loboptera decipiens which inhabit epigean, often influenced by human activities. The genome of Loboptera subterranea provides a valuable resource for understanding the genetic basis of how the Canarian Loboptera species evolved and thrived in subterranean environments. A total of 14 contiguous chromosomal pseudomolecules were assembled from the genome sequence. This chromosome-level assembly encompasses 2.7 Gb, composed of 486 contigs and 90 scaffolds, with contig and scaffold N50 values of 13.1 Mb and 202.7 Mb, respectively.

genomics↗

Reduction of embryonic E93 expression as a key factor for the evolution of insect metamorphosis

The early embryo of the cockroach Blattella germanica exhibits high E93 expression. In general, E93 triggers adult morphogenesis during postembryonic development, but in the cockroach E93 is also crucial in early embryogenesis. Moreover, the embryonic levels of E93 expression are high in hemimetabolan insects, while in holometabolans they are very low. They are also low in Thysanoptera and in Hemiptera Sternorrhyncha with postembryonic quiescent stages, as well as in Odonata, the nymph of which is very different from the adult. In ametabolans, such as the Zygentoma Thermobia domestica, E93 expression levels are very high in the early embryo, whereas during postembryonic development they are medium and relatively constant. Given that embryogenesis of hemimetabolans yields an adultiform nymph, we speculate that E93 plays some sort of adult triggering role in the embryo of these species. We conjecture that the reduction of E93 transcript levels in the embryo has been instrumental in the evolution of insect metamorphosis. The suppression of E93 expression during the nymphal period, and its concentration in the preadult stage, is consubstantial with the emergence of hemimetaboly. As such, attenuation of E93 expression in the embryo could have resulted in a larval genetic program and the emergence of holometaboly. Independent decreases of E93 expression in the embryo of Odonata, Thysanoptera, and different groups of Hemiptera Sternorrhyncha would have allowed the development of modified juvenile stages adapted to specific ecophysiological conditions.

developmental biology↗

The mayfly subimago explained. The regulation of metamorphosis in Ephemeroptera

In the Paleozoic era, more than 400 million years ago, insects continued molting after forming functional wings. Today, however, all flying insects stop molting after metamorphosis when they become fully winged. The only exception is the mayflies (Ephemeroptera), which molt in the subimago, a flying intermediate stage between the nymph and the adult. However, the identity and homology of the subimago remains underexplored. Debate remains regarding whether this stage represents a modified nymph, an adult, or a pupa like that of butterflies. Another relevant question is why do mayflies maintain the subimago stage despite the risk of molting fragile membranous wings. These questions have intrigued numerous authors but nonetheless, clear answers have not yet been found. However, by combining morphological studies, hormonal treatments, and molecular analysis in the mayfly species Cloeon dipterum, we found new answers to these old questions. We observed that treatment with a juvenile hormone analog in the last nymphal instar stimulated the expression of Kr-h1 gene and reduced that of E93, which suppress and trigger metamorphosis, respectively. Consequently, the subimago is not formed in these treated mayflies. This indicates that metamorphosis is determined prior to the formation of the subimago, which must therefore be considered an instar of the adult stage. We also observed that the forelegs dramatically grow between the last nymphal instar, the subimago, and the adult. This necessary growth is spread over the last two stages, which could explain, at least in part, the adaptive sense of the subimago.

evolutionary biology↗

DNA methylation in cockroaches is essential in early embryo development and reduces gene expression noise

The influence of DNA methylation on gene behavior, and its consequent phenotypic effects appear to be very important, but the details are not well understood. Insects offer a diversity of DNA methylation modes, making them an excellent lineage for comparative analyses. However, functional studies have tended to focus on quite specialized holometabolan species, such as wasps, bees, beetles, and flies. Here we have studied DNA methylation in a hemimetabolan insect, the cockroach Blattella germanica, a model of early-branching insects. In this cockroach, one of the main genes responsible for DNA methylation, DNA methyltransferase 1 (DNMT1), is expressed in early embryogenesis. In our experiments, DNMT1 interference by RNAi reduces DNA methylation and impairs blastoderm formation. Using Reduced Representation Bisulfite Sequencing (RRBS) and transcriptomic analyses, we observed that hypermethylated genes are associated with metabolism and are highly expressed, whereas hypomethylated genes are related to signaling and have low expression levels. Moreover, the expression change in hypermethylated genes is greter than that in hypomethylated genes, whereas hypermethylated genes have less expression variability than hypomethylated genes. The latter observation has also been reported for humans and in Arabidopsis plants. A reduction in expression noise may therefore be one of the few universal effects of DNA methylation.

developmental biology↗

E93-depleted adult insects preserve the prothoracic gland and molt again

Insect metamorphosis originated around the middle Devonian, associated with the innovation of the final molt; this occurs after the histolysis of the prothoracic gland (PG; which produces the molting hormone) in the first days of adulthood. We previously hypothesized that transcription factor E93 was crucial in the emergence of metamorphosis, since it triggers metamorphosis in extant insects. This work on the cockroach Blattella germanica reveals that E93 also plays a crucial role in the histolysis of PG, which fits the above hypothesis. Previous studies have shown that the transcription factor FTZ-F1 is essential for PG histolysis. We have found that FTZ-F1 depletion, towards the end of the final nymphal instar, downregulates the expression of E93, while E93-depleted nymphs molt to adults that retain a functional PG. Interestingly, these adults are able to molt again, which is exceptional in insects. The study of insects able to molt again in the adult stage may reveal clues as to how nymphal epidermal cells definitively become adult cells, and if it is possible to revert this process. Summary statementThe prothoracic gland disintegrates after insect metamorphosis. It was believed that the factor FTZ-F1 determines this disintegration. This work reveals that FTZ-F1 action is mediated by the factor E93.

developmental biology↗

Hemimetabolous insects elucidate the origin of sexual development via alternative splicing

Insects are the only animals in which sexual differentiation is controlled by sex-specific RNA splicing. The doublesex (dsx) transcription factor produces distinct male and female protein isoforms (DsxM and DsxF) under the control of the RNA splicing factor transformer (tra). tra itself is also alternatively spliced so that a functional Tra protein is only present in females; thus, DsxM is produced by default, while DsxF expression requires Tra. The sex-specific Dsx isoforms are essential for both male and female sexual differentiation. This pathway is profoundly different from the molecular mechanisms that control sex-specific development in other animal groups. In animals as different as vertebrates, nematodes, and crustaceans, sexual differentiation involves male-specific transcription of dsx-related transcription factors that are not alternatively spliced and play no role in female sexual development. To understand how the unique splicing-based mode of sexual differentiation found in insects evolved from a more ancestral transcription-based mechanism, we examined dsx and tra expression in three basal, hemimetabolous insect orders. We find that functional Tra protein is limited to females in the kissing bug Rhodnius prolixus (Hemiptera), but is present in both sexes in the louse Pediculus humanus (Phthiraptera) and the cockroach Blattella germanica (Blattodea). Although alternatively spliced dsx isoforms are seen in all these insects, they are sex-specific in the cockroach and the kissing bug but not in the louse. In B. germanica, RNAi experiments show that dsx is necessary for male, but not female, sexual differentiation, while tra controls female development via a dsx-independent pathway. Our results suggest that the distinctive insect mechanism based on the tra-dsx splicing cascade evolved in a gradual, mosaic process: sex-specific splicing of dsx predates its role in female sexual differentiation, while the role of tra in regulating dsx splicing and in sexual development more generally predates sex-specific expression of the Tra protein. We present a model where the canonical tra-dsx axis originated via merger between expanding dsx function (from males to both sexes) and narrowing tra function (from a general splicing factor to the dedicated regulator of dsx).

developmental biology↗

Myoglianin triggers the pre-metamorphosis stage in hemimetabolan insects

Insect metamorphosis is triggered by a decrease in juvenile hormone (JH) in the final juvenile instar. What induces this decline is therefore a very relevant question. Working with the cockroach Blattella germanica, we found that Myoglianin (Myo), a ligand in the TGF-{beta} signaling pathway, is highly expressed in the corpora allata (CA, the JH producing glands) and prothoracic glands (PG, which produce ecdysone) during the penultimate nymphal instar (N5). In the CA, high Myo levels during N5 repress the expression of jhamt, a JH biosynthesis gene. In the PG, decreasing JH levels trigger gland degeneration, mediated by the factors Kr-h1, FTZ-F1, E93 and IAP1. Also in the PG, a peak of myo expression in N5 stimulates the expression of ecdysone biosynthesis genes, such as nvd, thus enhancing the production of the metamorphic ecdysone pulse in N6. The myo expression peak in N5 also represses cell proliferation, which can contribute to enhance ecdysone production. The data indicate that Myo triggers the pre-metamorphic nymphal instar in B. germanica, and possibly in other hemimetabolan insects.

developmental biology↗

Zelda and the evolution of insect metamorphosis

In the Endopterygote Drosophila melanogaster, Zelda is a key activator of the zygotic genome during the maternal-to-zygotic transition (MZT). Zelda binds cis-regulatory elements (TAGteam heptamers), and makes chromatin accessible for gene transcription. Recently, Zelda has been studied in two other Endopterygotes: Apis mellifera and Tribolium castaneum, and the Paraneopteran Rhodnius prolixus. We have studied Zelda in the cockroach Blattella germanica, a hemimetabolan, short germ-band, and Polyneopteran species. Zelda protein of B. germanica has the complete set of functional domains, which is typical of lower insects. The TAGteam heptamers of D. melanogaster have been found in the B. germanica genome, and the canonical one, CAGGTAG, is present at a similar relative number in the genome of these two species and in the genome of other insects, suggesting that, although within certain evolutionary constraints, the genome admits as many CAGGTAG motifs as its length allows. Zelda-depleted embryos of B. germanica show defects involving the blastoderm formation and the abdomen development and have genes contributing to these processes down-regulated. We conclude that in B. germanica Zelda strictly activates the zygotic genome, within the MZT, a role conserved in more derived Endopterygote insects. In B. germanica, Zelda is expressed during MZT, whereas in D. melanogaster and T. castaneum it is expressed well beyond this transition. Moreover, in these species and A. mellifera, Zelda has functions even in postembryonic development. The expansion of Zelda expression and functions beyond the MZT in holometabolan species might have been instrumental for the evolutionary transition from hemimetaboly to holometaboly. In particular, the expression of Zelda beyond the MZT during embryogenesis might have allowed building the morphologically divergent holometabolan larva.\n\nAuthor summaryIn early insect embryo development, the protein Zelda is a key activator of the zygotic genome during the maternal-to-zygotic transition. This has been thoroughly demonstrated in the fruit fly Drosophila melanogaster, as well as in the red flour beetle Tribolium castaneum, both species belonging to the most modified clade of endopterygote insects, showing complete (holometabolan) metamorphosis. In these species, Zelda is expressed and have functions in early embryogenesis, in late embryogenesis and in postembryonic stages. We have studied Zelda in the German cockroach, Blattella germanica, which belong to the less modified clade of polyneopteran insects, showing an incomplete (hemimetabolan) metamorphosis. In B. germanica, Zelda is significantly expressed in early embryogenesis, being a key activator of the zygotic genome during the maternal-to-zygotic transition, as in the fruit fly and the red flour beetle. Nevertheless, Zelda is not significantly expressed, and presumably has no functions, in late embryogenesis and in postembryonic stages of the cockroach. The data suggest that the ancestral function of Zelda in insects with hemimetabolan metamorphosis was to activate the zygotic genome, a function circumscribed to early embryogenesis. The expansion of Zelda expression and functions to late embryogenesis and postembryonic stages might have been a key step in the evolutionary transition from hemimetaboly to holometaboly. In hemimetabolan species embryogenesis produces a nymph displaying the essential adult body structure. In contrast, embryogenesis of holometabolan species produces a larva that is morphologically very divergent from the adult. Expression of Zelda in late embryogenesis might have been a key step in the evolution from hemimetaboly to holometaboly, since it would have allowed the building the morphologically divergent holometabolan larva.

evolutionary biology↗

Hemimetabolous genomes reveal molecular basis of termite eusociality

Around 150 million years ago, eusocial termites evolved from within the cockroaches, 50 million years before eusocial Hymenoptera, such as bees and ants, appeared. Here, we report the first, 2GB genome of a cockroach, Blattella germanica, and the 1.3GB genome of the drywood termite, Cryptotermes secundus. We show evolutionary signatures of termite eusociality by comparing the genomes and transcriptomes of three termites and the cockroach against the background of 16 other eusocial and non-eusocial insects. Dramatic adaptive changes in genes underlying the production and perception of pheromones confirm the importance of chemical communication in the termites. These are accompanied by major changes in gene regulation and the molecular evolution of caste determination. Many of these results parallel molecular mechanisms of eusocial evolution in Hymenoptera. However, the specific solutions are remarkably different, thus revealing a striking case of convergence in one of the major evolutionary transitions in biological complexity.

evolutionary biology↗