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Bedoya, A. M.

Publications and source records attributed to Bedoya, A. M..

2 recordsLinked to original sources

Andean uplift, drainage basin formation, and the evolution of riverweeds (Marathrum, Podostemaceae) in northern South America

O_LINorthern South America is a geologically dynamic and species-rich region. While fossil and stratigraphic data show that reconfiguration of river drainages resulted from mountain uplift in the tropical Andes, investigations of the impact of landscape change on the evolution of the flora in the region have been restricted to terrestrial taxa. C_LIO_LIWe explore the role of landscape change on the evolution of plants living strictly in rivers across drainage basins in northern South America by conducting population structure, phylogenomic, phylogenetic networks, and divergence-dating analyses for populations of riverweeds (Marathrum, Podostemaceae). C_LIO_LIWe show that mountain uplift and drainage basin formation isolated populations of Marathrum and created barriers to gene flow across rivers drainages. Sympatric species hybridize and the hybrids show the phenotype of one parental line. We propose that the pattern of divergence of populations reflect the formation of river drainages, which was not complete until <4 Ma C_LIO_LIOur study provides a clear picture of the role of landscape change in shaping the evolution of riverweeds in northern South America, advances our understanding of the reproductive biology of this remarkable group of plants, and spotlights the impact of hybridization in phylogenetic inference. C_LI

evolutionary biology

Characterization of a Large Pericentric Inversion in Plateau Fence Lizards ,(Sceloporus tristichus): Evidence from Chromosome-scale Genomes

Spiny lizards in the genus Sceloporus are a model system among squamate reptiles for studies of chromosomal evolution. While most pleurodont iguanians retain an ancestral karyotype formula of 2n=36 chromosomes, Sceloporus exhibits substantial karyotype variation ranging from 2n=22 to 2n=46 chromosomes. In this study, we present two annotated chromosome-scale genome assemblies for the Plateau Fence Lizard (Sceloporus tristichus) in order to facilitate research on the role of pericentric inversion polymorphisms on adaptation and speciation. Based on previous karyotype work using conventional staining, the S. tristichus genome is characterized as 2n=22 with 6 pairs of macrochromosomes and 5 pairs of microchromosomes with a large pericentric inversion polymorphism on chromosome seven that is geographically variable. We provide annotated, chromosome-scale genomes for two lizards located at opposite ends of a dynamic hybrid zone that are each fixed for different inversion polymorphisms. The assembled genomes are 1.84 to 1.87 Gb (1.72 Gb for scaffolds mapping to chromosomes) with a scaffold N50 of 267.5 Mb. Functional annotation of the genomes resulted in 65,417 annotated genes, 16,426 of which were deduced to have a function. We confirmed the presence of a 4.62 Mb pericentric inversion on chromosome seven, which contains 59 annotated coding genes with known functions. These new genomic resources provide opportunities to perform genomic scans and investigate the formation and spread of pericentric inversions in a naturally occurring hybrid zone.

genomics