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Bede, J. C.

Publications and source records attributed to Bede, J. C..

3 recordsLinked to original sources

Aphids capture plant inter- and intraspecific chemodiversity

The role of chemodiversity in plant-insect interactions is widely recognised. However, our understanding of the extent to which chemodiversity connects both partners remains limited. Here, we investigated how aphid chemistry is linked to their plant diet and whether aphids capture plant inter- and intraspecific chemodiversity. Up to 93% of aphid chemical features were detected in plants. Untargeted metabolomics of aphids feeding on diets composed of distinct species or chemotypes within species unveiled the aphid capacity to capture inter- and intraspecific chemodiversity. Multiple chemodiversity indices and metabolic features significantly tracked diet variation and plant chemotypes were reflected in aphid metabolites. These features included phenolics and amino acids, likely ingested with the phloem sap, and fatty acids and terpenoids, potentially captured from the leaf surface. Overall, these findings expand our knowledge of the aphid plant-derived chemical repertoire and highlight that plant chemodiversity can be transmitted, supporting the need for chemodiversity preservation programs.

ecology↗

Molecular phylogenetics of Neotropical chrysomeline beetles: Evidence for a constrained history of host plant use

AO_SCPLOWBSTRACTC_SCPLOWThis study reconstructs the phylogeny of an expansive set of Neotropical leaf beetles in the subfamily Chrysomelinae. From 33 species in the genus Platyphora Gistel, and an additional 37 species representing 16 beetle genera, five genes, three nuclear, and two mitochondrial, were sequenced and used to obtain a well-supported molecular phylogeny using both Bayesian and Maximum Likelihood. The subtribes Chrysomelina and Doryphorina (sensu Daccordi 1982) were monophyletic, while the genus Platyphora was polyphyletic. The genus Leptinotarsa Chevrolat is confirmed to be distinct from Stilodes Chevrolat. Host plant family was recorded for both adults and larvae using direct observations where possible. Ancestral host plant use was reconstructed using Bayesian trait analyses. A complicated history of host plant switches among a restricted set of plant families is revealed: In the paraphyletic Platyphora, one clade that includes Proseicela and Leptinotarsa had two switches from Asclepiadiodeae to Solanaceae, one switch to Moraceae, and one switch to Malpighiaceae, another Platyphora clade had switches between Asteraceae and Rauvolfioideae, and from Rauvolfioideae to Asclepiadiodeae, with other members of the same clade feeding on Boraginaceae and Convolvulaceae. All species included in the clade containing Tritaenia and Stilodes fed on Malpighiaceae, and all species included in the Cosmogramma and Calligrapha clade fed on Malvaceae.

evolutionary biology↗

Chromosomal-level reference genome and microRNAs of the ricefield flatsedge Cyperus iria

BackgroundGrass-like plants in the Cyperaceae family, commonly known as sedges, have a global distribution and include many economically problematic weeds. The ricefield flatsedge, Cyperus iria, is an aggressive weed in rice crops in Asia. ResultHere, we present a chromosomal-level genome assembly for C. iria (461.2 Mb, scaffold N50 = 7.3 Mbp, 99.6% BUSCO score) providing potential targets for the control of this devastating weed. Based on the genome assembly and transcriptomes of vegetative tissues, 52,574 protein-coding genes were predicted to be encoded. A total of 26 conserved and 75 novel microRNAs, including 9 microRNA clusters, were also annotated. Synteny and microRNA cluster analyses further showed that C. iria had undergone at least one round of whole genome duplication. ConclusionThe genomic resource established in this study sets up a foundation to further address basic and applied questions in the Cyperaceae.

genomics↗