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Beattie, A. W.

Publications and source records attributed to Beattie, A. W..

2 recordsLinked to original sources

Convergent routes to haloterpenoid biosynthesis in red algae: identification of non-canonical UbiA-type terpene synthase gene clusters in the genus Laurencia

Red algae produce structurally diverse haloterpenoids unique to seaweeds, yet the enzymes responsible for generating many of their core terpene scaffolds remain unknown. Here, we report the identification of red algal UbiA-type terpene synthases (UTSs), a noncanonical enzyme family recently associated with terpene biosynthesis in bacteria and fungi. By prioritizing UbiA candidates located near putative biosynthetic genes, we identified eight candidate gene clusters across two red algal species, Laurencia pacifica and Laurencia subopposita. Using the heterologous host plant Nicotiana benthamiana, we show that the UbiA genes act as non-canonical TSs and that two UTSs produce the sesquiterpene bisabolene. The discovery of the bisabolene UTSs, LsUTS-2 and LpUTS-2, lays the foundation for laurane and chamigrane-type sesquiterpenoid production, addressing a prior biosynthetic quandary that bisabolene is not produced by established red algal class I TSs. Phylogenetic analyses distinguish the red algal UTSs from canonical UbiA prenyltransferases involved in primary metabolism and suggest they were acquired outside the red algal lineage. These findings expand the known distribution of UTSs and establish a previously unrecognized route to red algal terpene scaffolds.

biochemistry↗

Domoic acid biosynthesis and genome expansion in Nitzschia navis-varingica

Production of the neurotoxin domoic acid (DA) by benthic diatom Nitzschia navis-varingica poses considerable health and economic concerns. In this study, we employed whole genome sequencing and transcriptomic analyses of regionally distinct N. navis-varingica strains to unravel the genomic underpinnings of DA biosynthesis. Our analyses revealed sizable genomes--characterized by an abundance of repetitive elements and noncoding DNA--that exceed the size of any other pennate diatoms. Central to our findings is the discovery of an expanded domoic acid biosynthesis (dab) gene cluster, spanning over 60 kb and marked by a unique organization that includes core genes interspersed with additional genetic elements. Phylogenetic and syntenic comparisons indicate that transposition events may have driven the expansion and reorganization of this cluster. Biochemical assays validated that the kainoid synthase encoded by dabC catalyzes the formation of isodomoic acid B, thereby establishing a distinct chemotype in contrast to the DA profiles of planktonic diatoms. These results highlight the evolutionary trajectory of DA biosynthesis in diatoms and potential advantages conferred by genome expansion and enzyme diversification in dynamic marine environments. IMPORTANCEDomoic acid (DA) is a potent neurotoxin produced by marine micro- and macroalgae problematic to fisheries and toxic to humans and animals. Our study elucidates the molecular mechanisms underlying DA production in the widespread Western Pacific benthic diatom, Nitzschia navis-varingica. Genomic and biochemical insights add information to our understanding of the evolution of toxin production across diverse phyla and also fill a gap in the knowledge of secondary metabolism in marine diatoms. These findings provide a genetic framework for identifying toxin production and its impacts in the benthos of vulnerable, coastal ecosystems.

genomics↗