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Biology subjects

Bari, M. A.

Publications and source records attributed to Bari, M. A..

2 recordsLinked to original sources

Deep Learning for Sorghum Yield Forecasting using Uncrewed Aerial Systems and Lab-Derived Imagery

The AI revolution, advanced Graphics Processing Units (GPUs), and open-source platforms have enabled Machine Learning (ML) and Deep Learning (DL) algorithms to rapidly and accurately extract phenotypic features from Uncrewed Aerial System (UAS)-derived imagery. Such advancement leads to phenotypic digitization and sorghum yield forecasting. Yield analytics are critical for breeding programs to assess the genetics and breeding potential of genotypes to enhance cultivar development. This trial followed a three-replicated Randomized Complete Block Design (RCBD) with 36 diverse sorghum genotypes in 2023 at Ashland Bottoms, Kansas. The field images were captured 6 meters above using a DJI M300 drone equipped with the P1 sensor at 90{degrees}nadir and 45{degrees} oblique angles. This research trained YOLO and the Faster R-CNN (Detectron2) models to harness yield attributes from UAS field and lab images. The YOLO models outperformed the Faster R-CNN model in detecting sorghum panicles, achieving a mean average precision at 50% IoU (mAP@0.50) ranging from 0.92 to 0.98, compared to 0.61 to 0.89. Panicle detection from field imagery correlated at 0.86 with ground truth. Lab imagery analyses measured panicle size, seed counts, and seed area with correlation coefficients of 0.71, 0.95, and 0.25, respectively. Three machine learning models: Support Vector Regression (SVR), Decision Tree Regression (DTR), and Random Forest Regression (RFR) are used to predict yield with correlation coefficients of 0.58, 0.76, and 0.70, respectively. We observed that YOLO models are well-suited for extracting yield-attributing traits from images, which are then incorporated into ML regression models to improve yield prediction performance.

plant biology↗

Population dynamics of fruit flies (Diptera: Tephritidae) in a semirural area under subtropical monsoon climate of Bangladesh

Fruit flies belonging to Tephritidae family are highly destructive agricultural pests, posing a significant threat to various fruits and vegetables grown in Bangladesh. A comprehensive year-round survey was conducted at Atomic Energy Research Establishment (AERE) campus located in the central region of Bangladesh. Three types of male lures (methyl eugenol, cue-lure and zingerone) were used to detect and assess the diversity of pest fruit fly species. A total of seventeen species of Tephritidae fruit flies were detected in this survey. The Bactrocera carambolae fruit fly has been discovered for the first time in our survey area, indicating spread of its range towards the north-west region from its previous detection sites (Chattogram and Sylhet Divisions) in Bangladesh. Among the detected pest species, we identified six abundant species: Bactrocera dorsalis, Zeugodacus cucurbitae, Zeugodacus tau, Bactrocera rubigina, Bactrocera zonata, and Dacus longicornis. The most abundant species was the polyphagous fruit pest B. dorsalis, comprising 76.83% of all captured flies. The species Z. cucurbitae was the second most abundant, representing 13.82% of the total trapped flies. The fitted curve to survey data using Gaussian mixture model revealed the existence of overlapped subgroups in the population of B. dorsalis and Z. cucurbitae. In addition, our statistical analysis of the six abundant Tephritidae fruit fly species revealed correlation of population dynamics with several factors including temperature, rainfall, humidity, photoperiod, and fruiting time of host plant species in the selected area.

ecology↗