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Barbet, M.

Publications and source records attributed to Barbet, M..

2 recordsLinked to original sources

Modified Elek test improves in-vitro detection of diphtheria toxin

PurposeDiphtheria is caused by toxigenic strains of the Corynebacterium diphtheriae complex, mainly Corynebacterium diphtheriae and C. ulcerans. The diagnosis of diphtheria relies on detecting the diphtheria toxin (DT), for which Englers method of Eleks immunoprecipitation test is the gold standard. A recent optimization of Englers method was proposed by Melnikov and colleagues, showing higher sensitivity for C. ulcerans. The goal of our study was to test and adapt this optimized method, and to re-analyze apparent non-toxigenic tox gene bearing (NTTB) isolates from our collection. MethodsWe included 48 C. ulcerans, C. ramonii and C. diphtheriae isolates previously categorized as NTTB but for which no genetic explanation was found for the lack of DT expression. DT production was tested using Melnikovs method with further modifications made by us: i) increasing the antitoxin concentration; ii) using 5{degrees}C as the incubation temperature after 24h; and iii) modifying the layout of control and test strains on agar plates. Results35 of 38 C. ulcerans, 3 C. ramonii and 8 of 10 C. diphtheriae were found to be toxigenic. No genetic explanation was found regarding two non-toxigenic isolates (1 C. diphtheriae and 1 C. ulcerans), whereas for one C. diphtheriae, IS1132 was detected upstream of the tox gene. ConclusionOur modified implementation of Melnikovs Elek test improved our ability to detect diphtheria toxin production. Most isolates previously considered as NTTB but with no genetic explanation, were shown to be toxigenic using the novel method.

microbiology↗

Introductions and early spread of SARS-CoV-2 in France

Following the emergence of coronavirus disease (COVID-19) in Wuhan, China in December 2019, specific COVID-19 surveillance was launched in France on January 10, 2020. Two weeks later, the first three imported cases of COVID-19 into Europe were diagnosed in France. We sequenced 97 severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genomes from samples collected between January 24 and March 24, 2020 from infected patients in France. Phylogenetic analysis identified several early independent SARS-CoV-2 introductions without local transmission, highlighting the efficacy of the measures taken to prevent virus spread from symptomatic cases. In parallel, our genomic data reveals the later predominant circulation of a major clade in many French regions, and implies local circulation of the virus in undocumented infections prior to the wave of COVID-19 cases. This study emphasizes the importance of continuous and geographically broad genomic sequencing and calls for further efforts with inclusion of asymptomatic infections.

genomics↗