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Ban, K.

Publications and source records attributed to Ban, K..

5 recordsLinked to original sources

Cognitive exertion reshapes resting-state EEG markers across the adult lifespan

Resting-state electroencephalography (rsEEG) yields robust indices of ageing, notably individual alpha peak frequency (iAPF), alpha power, and the aperiodic exponent. Whether these markers reflect stable traits or shift with cognitive exertion remains unresolved, with direct consequences for lifespan and clinical research. We parameterised periodic and aperiodic rsEEG activity before and after cognitive tasks in a lifespan cohort (N = 390, aged 20-70), a five-year longitudinal follow-up (N = 100), and an independent older-adult dataset completing a different task (N = 71). Across datasets, cognitive exertion produced lifespan-wide iAPF slowing and increase in associated power. Notably, aperiodic shifts were age-dependent, with post-task steepening of the exponent in younger adults that progressively flattened with advancing age, resulting in a stronger effect of age on post-task exponents. Our results demonstrate that widely used spectral metrics exhibit acute state-dependency and post-task recordings offer a promising translational framework for indexing individual differences in healthy ageing and pathology. Trial registrationClinicaltrials.gov: NCT05155397

neuroscience↗

Chemical Boosting of Foldase Condensates Accelerates Oxidative Protein Folding

Dynamic biomolecular condensates play crucial roles in intracellular compartmentalization and physiological functions. While engineering tools for compartmentalization have expanded add-on functionalities, directly amplifying the inherent catalytic machinery within biological phase-separated droplets has remained elusive. Herein, we developed a phase-separated oxidative folding reaction chamber based on protein disulfide isomerase A6 (PDIA6) by chemically targeting its active site CxxC motif to enhance enzymatic activity within PDIA6 droplets. A para-substituted N-methylated pyridinylmethanethiol (pMePySH) enhanced the catalytic oxidative folding of bovine pancreatic trypsin inhibitor, proinsulin, and antibody up to 12-fold within in vitro PDIA6 droplets. Furthermore, pMePySH targeted PDIA6 foci within the endoplasmic reticulum, significantly promoting insulin secretion. These findings offer a powerful platform for the spatiotemporal manipulation of protein folding, with profound implications for the scalable manufacturing of therapeutic antibodies and other complex biopharmaceuticals.

bioengineering↗

Early Arousal Signals Drive Reward Learning and Subsequent Choice Behaviour

Learning to reinforce rewarding actions and avoid repeated mistakes is crucial for survival in dynamic environments. Yet, it remains unclear how distinct neural signals coordinate to implement reward-based decision-making and behavioural adjustment. We obtained simultaneous electroencephalography (EEG) and pupillometry during a probabilistic reversal learning task. Leveraging single-trial EEG, we first replicate the presence of two feedback-locked neural representations; an early signal previously linked to alertness and switching behaviours following negative feedback and a late signal associated with value updating and reward learning. Using single-trial pupillometry, we then show that differences in feedback-evoked pupil responses between positive and negative feedback are driven primarily by negative feedback encoding. Jointly examining these EEG and pupillometry signatures, we show that following negative feedback, increased trial-by-trial coupling between the pupil response and the early, but not the late, EEG signal is linked to increased uncertainty and exploration tendency as well as reduced accuracy and evidence accumulation on the next trial. Consistent with previous research implicating the locus-coeruleus-noradrenaline system in uncertainty signalling and network resets, we propose that when internal estimates of contextual uncertainty are high following negative feedback, an early signal, likely regulated by locus coeruleus activity, implements a network reset in reward learning structures of a later learning signal. This interruption may simultaneously increase the neural gain related to the processing of novel information and decrease the influence of existing representations in reward learning structures, in turn improving performance by creating new, more accurate internal representations of the external world. Significance StatementThe current study jointly examines EEG and pupillometry signatures associated with reversal-learning during reward-based learning. It suggests that when internal estimates of contextual uncertainty are high following negative feedback, an early neural signal, likely regulated by locus coeruleus activity, implements a network reset in reward learning structures of a later learning signal. This interruption may simultaneously increase the neural gain related to the processing of novel information and decrease the influence of existing representations in reward learning structures, in turn improving performance by creating new, more accurate internal representations of the external world.

neuroscience↗

Slow-wave sleep is associated with nucleus accumbens volume in elderly adults

Slow-wave sleep (SWS) is essential for restorative neural processes, and its decline is associated with both healthy and pathological ageing. Building on previous rodent research, this longitudinal study identified a significant association between nucleus accumbens (NAcc) volume and SWS duration in cognitively unimpaired older adults. Our findings support the involvement of the NAcc in ageing-related modulation of SWS and suggest potential therapeutic targets for improving SWS.

neuroscience↗

CRISPR Knock-in Designer: automatic oligonucleotide design software to introduce point mutations using CRISPR/Cas9

Knock-in of precise point mutations into protein-coding genes has been one of the earliest and most important applications of Clustered Regularly Interspaced Palindromic Repeats (CRISPR)/Cas9. The ability to perform such precise gene editing is crucial to interrogate the function of specific protein residues and to create models of human diseases caused by protein amino acid changes. The homologous protein residues can be mutated in model animal species, and the consequences of these mutations can be studied, leading to a better understanding of the disease in question. Design of point mutation knock-in strategies has been a combination of manual steps assisted by several computational tools resulting in a time-consuming process and preventing a single rapid and integrated solution. We have therefore designed CRISPR Knock-in Designer, which can perform rapid and automatic design of point mutation knock-in DNA oligonucleotides upon provision of the mutation, a guide RNA, and essential identifier or sequence information. The tool supports most experimentally established CRISPR types and has multiple options for the resulting oligonucleotides to satisfy the needs of most users. We also provide allele-specific PCR-based and restriction enzyme-based genotyping strategies as part of the program output. CRISPR Knock-in Designer adjusts to the genomic context of any target codon and tries to design knock-in strategies when a codon straddles two exons, a situation we explored in whole genomes of several model species. CRISPR Knock-in Designer output can also be adapted for use with some of the newer Prime Editing design tools to facilitate the introduction of a specific mutation sequence using this advanced technology.

genetics↗