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Balakrishnan, K. A.

Publications and source records attributed to Balakrishnan, K. A..

2 recordsLinked to original sources

Markov models bridge behavioral strategies and circuit principles facilitating thermoregulation

Behavioral thermoregulation is critical for survival across animals, including endothermic mammals. However, we do not understand how neural circuits control navigation towards preferred temperatures. Zebrafish exclusively regulate body temperature via behavior, making them ideal for studying thermal navigation. Here, we combine behavioral analysis, machine learning and calcium imaging to understand how larval zebrafish seek out preferred temperatures within thermal gradients. By developing a stimulus-controlled Markov model of thermal navigation we find that hot avoidance largely relies on the modulation of individual swim decisions. The avoidance of cold temperatures, a particular challenge in ectotherms, however relies on a deliberate strategy combining gradient alignment and directed reversals. Calcium imaging identified neurons within the medulla encoding thermal stimuli that form a place-code like representation of the gradient. Our findings establish a key link between neural activity and thermoregulatory behavior, elucidating the neural basis of how animals seek out preferred temperatures.

neuroscience↗

A model-free approach to link neural activity to behavioral tasks

Brains are not engineered solutions to a well-defined problem but arose through selective pressure acting on random variation. It is therefore unclear how well a model chosen by an experimenter can relate neural activity to experimental conditions. Here we developed "Model identification of neural encoding (MINE)." MINE is an accessible framework using convolutional neural networks (CNN) to discover and characterize a model that relates aspects of tasks to neural activity . Although flexible, CNNs are difficult to interpret. We use Taylor decomposition approaches to understand the discovered model and how it maps task features to activity. We apply MINE to a published cortical dataset as well as experiments designed to probe thermoregulatory circuits in zebrafish. MINE allowed us to characterize neurons according to their receptive field and computational complexity, features which anatomically segregate in the brain. We also identified a new class of neurons that integrate thermosensory and behavioral information which eluded us previously when using traditional clustering and regression-based approaches.

neuroscience↗