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Atbasi, A.

Publications and source records attributed to Atbasi, A..

2 recordsLinked to original sources

A Three-Layered Agent-Based Model of Adult Hippocampal Neurogenesis (HANG-AB3L) with Stochastic Cell Fate Determination

Hippocampal adult neurogenesis (HANG) is a highly regulated process where neural stem cells progress through distinct stages--from Type 1 radial glia-like cells to mature neurons--via a complex series of proliferative and differentiative divisions. While recent in vivo imaging has provided valuable insights to cellular processes, the exact relationship between individual cell-fate decisions and long-term population stability remains difficult to quantify empirically. In this study, we utilized an agent-based (AB) model to simulate the stochastic dynamics of the hippocampal neurogenic niche. Our results demonstrate that while individual progenitor lineages exhibit high variability and probabilistic division symmetries (proliferative symmetric, asymmetric, and differentiative symmetric), the system achieves deterministic stability as the initial progenitor density increases. We found that the T1 progenitor pool follows a negative exponential decay profile, with its longevity primarily dictated by the differentiation rate (d,0). Critically, the terminal output of immature neurons (CIN,t) was non-linearly coupled to the proliferative capacity of transit-amplifying cells (pp,0); even marginal increases in symmetric proliferative divisions resulted in an exponential expansion of the neuronal pool. These findings suggest that the homeostatic maintenance of the hippocampal niche is governed by a kinetic tuning of division probabilities, providing a theoretical bridge between single-cell stochasticity and robust tissue-level output.

developmental biology↗

Reactive Pericytes Lead to Microvascular Dysfunction and Cortical Neurodegeneration During Experimental Autoimmune Encephalomyelitis

The mechanisms underlying neurodegeneration in multiple sclerosis remain incompletely understood. In this study, we aimed to investigate the role of vascular dysfunction in cortical neurodegeneration using a chronic cranial window model of experimental autoimmune encephalomyelitis in mice. After the induction of experimental autoimmune encephalomyelitis with myelin oligodendrocyte glycoprotein peptides in C57BL/6J mice, we assessed cerebrovascular reactivity though a chronic cranial window using laser speckle contrast imaging and intrinsic optical signal imaging in awake animals. We observed a significant reduction in cortical cerebrovascular reactivity during peak inflammation in the EAE group, as detected by laser speckle contrast imaging after 5% hypercapnia (p=0.04) and optical signal imaging after whisker stimulation (p=0.008). Histological analysis revealed a diffuse increase in CD13+ pericyte coverage (p=0.001), accompanied by focal IgG deposition within the microvascular lumen (p=0.04) and increased amount of CD45+ leukocytes stalled in microvessels (p=0.03) in the cortex of experimental autoimmune encephalomyelitis mice. Microglial activation was also present in the cortex of experimental autoimmune encephalomyelitis mice (p=0.04) and was particularly evident around microvessels with IgG deposition. Subpial and intracortical foci exhibiting loss of NeuN reactivity (p=0.03) and axonal loss (p=0.007) were detected in experimental autoimmune encephalomyelitis, but not in control mice. Altogether, these results demonstrate that microvascular function and neurovascular unit elements are globally affected in the cortex during autoimmune neuroinflammation and is related to neurodegeneration.

neuroscience↗