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Assis, B. A.

Publications and source records attributed to Assis, B. A..

3 recordsLinked to original sources

Plastic mechanisms for unraveling a universal trade-off between water loss and respiration

The expression of phenotypes is often constrained by functional conflicts between traits, and the resulting trade-offs can impose limits on phenotypic and taxonomic diversity. However, organisms can circumvent trade-offs in specific environmental contexts through phenotypic plasticity, though the mechanisms that drive trade-offs or allow organisms to resolve trade-offs are often cryptic. The trade-off between water loss and gas exchange poses a fundamental challenge for terrestrial life because the capacity to absorb oxygen is limited by the risk of desiccation from water loss across respiratory surfaces. Here, we investigated the capacity to mitigate this trade-off in a lungless salamander that breathes exclusively across its skin. We measured water loss and oxygen uptake using respirometry in field- and laboratory-based studies to identify plastic responses to environmental variation, coupled with gene expression analyses to investigate biological pathways that regulate the trade-off. Though the trade-off between oxygen uptake and water loss was generally strong, we observed that its strength changed over time in the field and laboratory. At the molecular level, we found support for antagonistic pleiotropy in multiple pathways that simultaneously affect both physiological traits (e.g., via vasoconstriction and downregulation of aerobic respiration), and for mechanisms that mitigate the trade-off by affecting only one trait (e.g., oxygen binding affinity, melanin synthesis). As organisms disentangle such conflicts, however, alternative trade-offs are likely to arise. Our study provides evidence that alternative pathways allow organisms to mitigate pleiotropic conflicts, which ultimately may allow greater phenotypic diversity and persistence in novel environments.

evolutionary biology↗

Genomic signatures of adaptation in native lizards exposed to human-introduced fire ants

Understanding the process of genetic adaptation in response to human-mediated ecological change will help elucidate the eco-evolutionary impacts of human activity. Red fire ants (Solenopsis invicta) spread across Southeastern USA since their accidental introduction via Port Mobile, Alabama in the 1930s, serving today as both novel venomous predator and novel toxic prey to native eastern fence lizards (Sceloporus undulatus). To identify potential signatures of genetic adaptation in lizards to invasive fire ants, we generated whole genome sequencing data from 420 native fence lizards sampled across three populations, two of which had not been invaded by fire ants (in Tennessee and Arkansas) and one which had been invaded for [~]70 years (Alabama). We detected signatures of positive selection exclusive to the exposed Alabama population for genetic variants overlapping genes related to the membrane attack complex of the complement immune system, growth factor pathways, and morphological development. Prior work identified a relationship between increased lizard survival of fire ant attack and longer hind limbs, which lizards use to remove ants from their bodies. Furthermore, we conducted a genome-wide association study with 381 Alabama lizards to identify 24 hind limb length-associated genetic loci. For two loci, positive-effect alleles occur in high frequency and overlap genomic regions that are highly differentiated from the populations naive to fire ants. Collectively, these findings represent plausible genetic adaptations in response to fire ant invasion, whereby morphological differentiation may increase survival against swarming ants and altered immune responses may allow the exploitation of a novel, toxic food resource. Significance statementHuman activity can force interactions between species from distinct ecological backgrounds. These interactions can consequently impose novel selective pressures on endemic populations via predation or disruption of ecological niches through community-wide effects. While some endemic taxa have been able to adapt biologically to these disruptions, we do not have a full understanding of the underlying genetic processes that may allow it. Here we identify genomic signatures of recent adaptation nearby genes involved in morphological and immunological processes in native fence lizards that are consistent with pressures imposed by the venomous, predatory fire ants introduced by humans. These signatures are largely absent from lizard populations that are naive to fire ants.

evolutionary biology↗

Shared and unique responses in the microbiome of allopatric lizards reared in a standardized environment

The gut microbiome can influence host fitness and, consequently, the ecology and evolution of natural populations. Microbiome composition can be driven by environmental exposure but also by the hosts genetic background and phenotype. To contrast environmental and genetic effects on the microbiome we leverage preserved specimens of eastern fence lizards from allopatric lineages east and west of the Mississippi River but reared in standardized conditions. Bacterial composition was indistinguishable between lineages but responded significantly to host age - a proxy for environmental exposure. This was accompanied by a continuous decrease in bacterial diversity in both lineages, partially driven by decreasing evenness seen only in western lizards. These findings indicate that longer exposure to a homogeneous habitat may have a depreciating effect on microbiome diversity in eastern fence lizards, a response shared by both lineages. We highlight the importance of such effects when extrapolating patterns from laboratory experiments to the natural world.

microbiology↗