Amos, N. | bioRxiv Science

bioRxiv2025

Loss of Brain Structural qMRI Signatures in Aging

The human brain undergoes significant changes during aging, affecting its macrostructure and microstructure features and impacting its functionality. These aging-related changes are oftentimes linked to different neurodegenerative diseases. Previous studies using MRI and molecular analyses have proposed that aging in each individual brain leads to increased similarity between different brain regions, whereas on the population level, they show greater variability. We investigated these hypotheses using multi-parametric, microstructural, quantitative MRI (qMRI) approaches. Using seven qMRI parametric methods in data from young and older adults, we created unique microstructural signatures of 128 brain regions. Our results supported both hypotheses: First, that inter-regional microstructural similarity is stronger within older individuals; and second, that the variability in microstructural signatures across individuals is also greater in older than in younger adults. Our findings provide new insights into the brains microstructural changes during aging and demonstrate the potential of using multi-parameter qMRI techniques in neuroscience research.

neuroscience↗

bioRxiv2016

Mitochondrial-nuclear interactions maintain a deep mitochondrial split in the face of nuclear gene flow

Metabolic processes in eukaryotic cells depend on interactions between mitochondrial and nuclear gene products (mitonuclear interactions). These interactions could play a direct role in population divergence. We studied the evolution of mitonuclear interactions in a widespread passerine that experienced population divergence followed by bi-directional mitochondrial introgression into different nuclear backgrounds. Using >60,000 SNPs, we quantified patterns of nuclear genetic differentiation between populations that occupy different climates and harbour deeply divergent mitolineages despite ongoing nuclear gene flow. Analyses were performed independently for two sampling transects intersecting mitochondrial divergence in different nuclear backgrounds. In both transects, low genome-wide nuclear differentiation was accompanied by strong differentiation at a ~15.4 Mb region of chromosome 1A. This region is enriched for genes performing mitochondrial functions. Molecular signatures of selective sweeps in this region alongside those in the mitochondrial genome suggest a history of adaptive mitonuclear co-introgression. The chromosome 1A region has elevated linkage disequilibrium, suggesting that selection on genomic architecture may favour low recombination among nuclear-encoded genes with mitochondrial functions. In this system, mitonuclear interactions appear to maintain the geographic separation of two mitolineages in the face of nuclear gene flow, supporting mitonuclear co-evolution as an important vehicle for climatic adaptation and population divergence.

evolutionary biology↗