bioRxiv Science⌕ Search

Biology subjects

Amelia, T. S. M.

Publications and source records attributed to Amelia, T. S. M..

2 recordsLinked to original sources

Enrichment of bioplastic degraders in mesophilic compost from widespread degradation potential in the environment

Polylactic acid (PLA) is a polymer that is known to exhibit compostability at thermophilic temperatures, and this activity is thought to be connected to the presence of PLA hydrolyzability in environmental microbes. We recently developed a set of compost that can biodegrade PLA at mesophilic conditions, and one possible reason underlying our success could be due to the enrichment of PLA hydrolyzability. Here, we investigated the potential selection of bioactivities related to PLA breakdown in our trained compost and surveyed the occurrences of those activities in the environment for comparison. Ten different environments were sampled, including PLA, larval gut of black soldier flies, and organic material from our trained compost, as well as terrestrial soil, estuarine sediment, brackish water, shell biofilm, coastal stranded polystyrene, bottle, and bottle cap. We found a small fraction of cultivable bacteria in many samples that harbored PLA degradability. For our trained compost, PLA-degrading isolates were twice as efficient as those from other environments, even though the frequency at which they were detected was not significantly higher. These findings suggested that PLA breakdown ability is commonly present at a low percentage in most environments, and that our trained compost has been able to select for more effective isolates. As this enhancement is likely insufficient to explain the increase in PLA compostability in our trained compost compared to standard mesophilic composts, we propose that additional microbial activities are needed to act synergistically and overcome the requirement for elevated temperature in PLA composting. IMPORTANCEThis study represents our work in investigating the biodegradation activity of the most common bioplastic, PLA, in the environment and in a special compost we recently developed that exhibited the novel ability of being able to achieve PLA composting at ambient temperatures. Our work is a rare survey that compares PLA hydrolytic activity across different environments, helping unmask the underlying prevalence of environmental PLA hydrolysis activity, as well as whether our special compost is especially enriched for such activity, would facilitate the design of PLA biodegradation implementation strategies. We found that PLA hydrolytic activity was generally present in environmental microbes at low frequencies, and that our special compost selected for those that were more efficient. However, full PLA compostability under mesophilic conditions likely depends on embedded, synergistic microbial functions beyond hydrolysis alone, motivating future work to disentangle complementary activities that collectively enable complete breakdown.

microbiology↗

Mesophilic compostability of polylactic acid and the associated microbiome as revealed by metagenomics

Polylactic acid (PLA), the most popular bioplastic, has high sustainability potential as it is bio-sourced and also harbors biodegradability. A form of its biodegradability is via composting, and it was previously established that thermophilic temperatures are needed for PLA breakdown in composts. Here we report the development of composts that have overcome the temperature requirement needed for PLA composting. Our mesophilic composts exhibited clear PLA biodegradability, and this is due to specific biological activity enriched in our material. To investigate the nature of this mesophilic activity, we conducted metagenomics analysis to reveal the microbial composition and enzyme-coding potential associated with PLA biodegradation. These efforts revealed multiple enzyme subtypes with strong enrichment on PLA surfaces in our trained composts, and the top candidate was a type of hydro-lyase, an enzyme that can cleave carbon-carbon and carbon-oxygen bonds, both present in the chemical structure of PLA, in the absence of water. Hydro-lyases represent a novel class of enzymes that could facilitate PLA degradation, and our results point to the model that the combinatorial action of multiple types of enzymes is what drives PLA biodegradation and how the temperature barrier for PLA composting is overcome.

microbiology↗