Biology subjects

Allison, C.

Publications and source records attributed to Allison, C..

6 recordsLinked to original sources

bioRxiv2026

Associations between the environment, brain, mental health, and cognition across adolescence

Adolescence is a critical period for the development of the brain, cognition, and mental health, which are shaped by a wide range of environmental factors. In the present study, we analysed the Adolescent Brain and Cognitive Development (ABCD) dataset to examine how a range of proximal (e.g., socioeconomic status, familial circumstances) and distal (e.g., neighbourhood conditions, access to healthcare and education) environmental factors are associated with changes in centile-based measures of brain structure, and whether these brain differences subsequently mediate variations in cognition and mental health. We analysed these associations both at baseline (N = 6,911; 3,605 M, 3,606 F; mean age = 9.93) and longitudinally across three timepoints (N = 1,628; 879 M, 749 F; ages 8-15). At baseline, a more advantaged proximal and distal environment was associated with larger volumes across the whole brain relative to age- and sex-matched peers, which, in turn, mediated better mental health outcomes and cognitive performance. In the longitudinal analysis, the childhood environment predicted changes in brain structure across adolescence, and these structural changes predicted changes in mental health and cognition. The childhood environment also predicted cognitive but not mental health changes across adolescence, suggesting that these associations may already be established early in adolescence. These findings provide insight into how environmental and neural factors shape adolescent mental health and cognition, with potential implications for early intervention strategies aimed at promoting positive developmental outcomes.

neuroscience↗

bioRxiv2025

Neonatal brain volumes and birth characteristics predict behavioural outcomes in toddlerhood

BackgroundEarly brain structure and birth factors (e.g., sex, birth weight, gestational age at birth) are understood as critical to shaping lifelong developmental and psychopathological outcomes. MethodsUsing data from the Developing Human Connectome Project, we examined whether neonatal brain volumes and birth factors predict developmental and socioemotional outcomes in toddlerhood. Structural MRI scans were acquired from 391 infants at birth (193 females, 198 males; mean age = 8 days), with follow-up behavioural assessments conducted in toddlerhood (mean age = 18 months). ResultsResults demonstrated that larger neonatal brain volumes were associated with lower autistic traits and higher cognitive, language and motor outcomes. A higher gestational age and weight at birth were associated with higher scores on various of these outcomes - an effect that was partially mediated by larger brain volumes at birth. Females showed higher language scores compared to males, though this effect was suppressed rather than mediated by neonatal brain volumes. ConclusionsThese findings demonstrate how birth factors interactively shape early developmental and neuropsychiatric outcomes.

neuroscience↗

bioRxiv2025

Mapping Brain Growth and Sex Differences Across Prenatal to Postnatal Development

The perinatal period, encompassing both prenatal and early postnatal stages, is a highly dynamic and foundational phase of brain development. Despite its significance, limited work has tracked brain growth continuously across prenatal to postnatal development. In this study, we analysed one of the largest perinatal MRI datasets from the Developing Human Connectome Project (798 scans from 699 unique individuals: 263 prenatal and 535 neonatal; 380 males and 319 females) to model age-related changes and sex differences in brain volumes from 21 to 45 weeks postconceptional age. We found that total brain volume grew at an increasing rate, with white matter dominating mid-gestational growth and gray matter dominating late-gestational and postnatal growth. Subcortical gray matter structures showed distinct trajectories and earlier peak growth rates compared to cortical gray matter structures. Additionally, sex differences in brain growth patterns were observed, with males showing greater volumetric increases with age compared with females. The findings demonstrate the evolving structural dynamics of perinatal brain development as well as the importance of integrating prenatal and postnatal neuroimaging to map continuous early brain growth trajectories.

neuroscience↗

bioRxiv2024

Sex Differences in Human Brain Structure at Birth

Sex differences in human brain anatomy have been well-documented; however, their underlying causes remain controversial. Neonatal research offers a pivotal opportunity to address this long-standing debate. Given that postnatal environmental influences (e.g., gender socialisation) are minimal at birth, any sex differences observed at this stage can be more readily attributed to prenatal influences. Here, we assessed on-average sex differences in global and regional brain volumes in 514 newborns (236 birth-assigned females and 278 birth-assigned males) using data from the developing Human Connectome Project. On average, males had significantly larger intracranial and total brain volumes, even after controlling for birth weight. After controlling for total brain volume, females showed higher total cortical gray matter volumes, whilst males showed higher total white matter volumes. After controlling for total brain volume in regional comparisons, females had increased white matter volumes in the corpus callosum and increased gray matter volumes in the bilateral parahippocampal gyri (posterior parts), left anterior cingulate gyrus, bilateral parietal lobes, and left caudate nucleus. Males had increased gray matter volumes in the right medial and inferior temporal gyrus (posterior part) and right subthalamic nucleus. Effect sizes ranged from small for regional comparisons to large for global comparisons. While postnatal experiences likely amplify sex differences in the brain, our findings demonstrate that several global and regional on-average sex differences are already present at birth.

neuroscience↗

bioRxiv2022

Metabolomic, photoprotective, and photosynthetic acclimatory responses to post-flowering drought in sorghum

Climate change is globally affecting rainfall patterns, necessitating the improvement of drought tolerance in crops. Sorghum bicolor is a drought-tolerant cereal capable of producing high yields under water scarcity conditions. Functional stay-green sorghum genotypes can maintain green leaf area and efficient grain filling in terminal post-flowering water deprivation, a period of ~10 weeks. To obtain molecular insights into these characteristics, two drought-tolerant genotypes, BTx642 and RTx430, were grown in control and terminal post-flowering drought field plots in the Central Valley of California. Photosynthetic, photoprotective, water dynamics, and biomass traits were quantified and correlated with metabolomic data collected from leaves, stems, and roots at multiple timepoints during drought. Physiological and metabolomic data was then compared to longitudinal RNA sequencing data collected from these two genotypes. The metabolic response to drought highlights the uniqueness of the post-flowering drought acclimation relative to pre-flowering drought. The functional stay-green genotype BTx642 specifically induced photoprotective responses in post-flowering drought supporting a putative role for photoprotection in the molecular basis of the functional stay-green trait. Specific genes are highlighted that may contribute to post-flowering drought tolerance and that can be targeted in crops to maximize yields under limited water input conditions. HighlightPathways contributing to the long-term maintenance of photosynthetic activity in terminal post-flowering drought are revealed by a comprehensive approach combining in-field photosynthetic physiological analysis, metabolomics, and transcriptomics.

plant biology↗

bioRxiv2019

Missense mutations in the MLKL brace region lead to lethal neonatal inflammation in mice and are present in high frequency in humans.

We have isolated a mouse strain with a single missense mutation in the gene encoding MLKL, the essential effector of necroptotic cell death. The resulting substitution lies within the two-helix brace and confers constitutive, RIPK3 independent, killing activity to MLKL. Mice homozygous for MlklD139V develop lethal inflammation within days of birth, implicating the salivary glands and pericardium as hotspots for necroptosis and inflammatory infiltration. The normal development of MlklD139V homozygotes until birth, and the absence of any overt phenotype in heterozygotes provides important in vivo precedent for the capacity of cells to clear activated MLKL. These observations offer an important insight into the potential disease-modulating roles of three common human MLKL polymorphisms that encode amino acid substitutions within or adjacent to the brace region. Compound heterozygosity of these variants is found at up to 12-fold the expected frequency in patients that suffer from a pediatric autoinflammatory disease, CRMO.

cell biology↗