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Afshar, N.

Publications and source records attributed to Afshar, N..

3 recordsLinked to original sources

A microscopy reporter for cGAMP reveals rare cGAS activation following DNA damage, and a lack of correlation with micronuclear cGAS enrichment

Cyclic GMP-AMP (cGAMP) synthase (cGAS) is the primary intracellular responder to pathogen DNA. Upon DNA-binding, cGAS generates cGAMP, which binds to STING, ultimately driving inflammatory signalling. Although normally silenced on self-DNA, cGAS can be activated during genotoxic stress. A universal by-product of these conditions are micronuclei, which accumulate cGAS, and which are therefore thought to be major cGAS activators. However, due to the inability to visualise cGAS activation in single cells, this hypothesis remains largely untested. Here we solve this question with an improved intracellular cGAMP reporter, which is compatible with microscopy, flow-cytometry and plate reader setups. Surprisingly, cGAS activation in response to multiple types of genotoxic stress is limited to a subfraction of cells and does not correlate with cGAS enrichment in micronuclei. Overall, our findings suggest a revised model of innate immune signalling in response to genotoxic stress, and introduce a novel and flexible tool with which to examine this model in future.

cell biology↗

Rad51 Interaction Analysis Reveals a Functional Interplay Among Recombination Auxiliary Factors

Although Rad51 is the key protein in homologous recombination (HR), a major DNA double-strand break repair pathway, several auxiliary factors interact with Rad51 to promote productive HR. Here, we present an interdisciplinary characterization of the interaction between Rad51 and Swi5-Sfr1, a widely conserved auxiliary factor. NMR and site-specific crosslinking experiments revealed two distinct sites within the intrinsically disordered N-terminus of Sfr1 that cooperatively bind to Rad51. Although disruption of this binding severely impaired Rad51 stimulation in vitro, interaction mutants did not show any defects in DNA repair. Unexpectedly, in the absence of the Rad51 paralogs Rad55-Rad57, which constitute another auxiliary factor complex, these interaction mutants were unable to promote DNA repair. Our findings provide molecular insights into Rad51 stimulation by Swi5-Sfr1 and suggest that, rather than functioning in an independent subpathway of HR as was previously proposed, Rad55-Rad57 facilitates the recruitment of Swi5-Sfr1 to Rad51.

molecular biology↗

Time-resolved analyses of elemental distribution and concentration in living plants: An example using manganese toxicity in cowpea leaves

O_LIKnowledge of elemental distribution and concentration within plant tissues is crucial in the understanding of almost every process that occurs within plants. However, analytical limitations have hindered the microscopic determination of changes over time in the location and concentration of nutrients and contaminants in living plant tissues.\nC_LIO_LIWe developed a novel method using synchrotron-based micro X-ray fluorescence (-XRF) that allows for laterally-resolved, multi-element, kinetic analyses of plant leaf tissues in vivo. To test the utility of this approach, we examined changes in the accumulation of Mn in unifoliate leaves of 7-d-old cowpea (Vigna unguiculata) plants grown for 48 h at 0.2 and 30 M Mn in solution.\nC_LIO_LIRepeated -XRF scanning did not damage leaf tissues demonstrating the validity of the method. Exposure to 30 M Mn for 48 h increased the initial number of small spots of localized high Mn and their concentration rose from 40 to 670 mg Mn kg-1 fresh mass. Extension of the two-dimensional -XRF scans to a three-dimensional geometry provided further assessment of Mn localization and concentration.\nC_LIO_LIThis method shows the value of synchrotron-based -XRF analyses for time-resolved in vivo analysis of elemental dynamics in plant sciences.\nC_LI

plant biology↗